gatk --java-options "-Xmx10g -Xms1000m" HaplotypeCaller -R Gallus_gallus.Gallus_gallus-5.0.dna.toplevel_chr25-26.fa -I SRR7062654.md.recal.bam -O SRR7062654.md.recal.g.vcf -ERC GVCF gatk --java-options "-Xmx10g -Xms1000m" HaplotypeCaller -R Gallus_gallus.Gallus_gallus-5.0.dna.toplevel_chr25-26.fa -I SRR7062655.md.recal.bam -O SRR7062655.md.recal.g.vcf -ERC GVCF