>rep1_1_repE(pAMbeta1)_AF007787
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKSSMIGGRGVVLTSEE
AIQENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTAKETISAS
DILTTAIDLGFMPTMIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLTVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLIGRNNVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKIVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREVLGIPERTLDKLLKVLKANQE
IFFKIKPGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTG
>rep1_2_repS(pBT233)_X64695
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKKSMIGGRGVVLTSEE
AIHENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTEKETISAS
DILTTAIDLGFMPTLIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLMVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLVGRNSVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKLVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREALGIPERTLDKLLKVLKANQE
IFFKIKSGRNGGIQLASGKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTG
>rep1_3_repR(pGB354)_U83488
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKKSMIGGRGVVLTSEE
AIHENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTEKETISAS
DILTTAIDLGFMPTLIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLTVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLVGRNSVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKIVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLATTKKEIREVLGIPERTLDKLLKVLKANQE
IFFKIKPGRNGGIQLASVKSLLLSIIKLKKEERESYIKALTASFNLERTFIQETLNKLAE
RPKTDPQLDLFSYDTG
>rep1_4_repE(orf17)_NC011140
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKSSMIGGRGVVLTSEE
AIQENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTAKETISAS
DILTTAIDLGFMPTMIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLTVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLIGRNNVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKIVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREVLGIPERTLDKLLKVLKANQE
IFFKIKPGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTG
>rep1_5_CDS6(pRE25)_X92945
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKKSMIGGRGVVLTSEE
AIHENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTEKETISAS
DILTTAIDLGFMPTLIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLMVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLVGRNSVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKLVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREALGIPERTLDKLLKVLKANQE
IFFKIKSGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTG
>rep1_6_repE(pTEF1)_AE016833
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKKSMIGGRGVVLTSEE
AIHENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTAKETISAS
DILTTAIDLGFMPTLIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLTVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLIGRNNVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKLVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREALGIPERTLDKLLKVLKANQE
IFFKIKPGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALSEFFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTG
>rep2_1_ORF(E.faeciumContig1183)_JDOE
MLSEIYSAILKNGLRTYKYRNSTMKPAGHIDSSRSGAIFAYRSKQLMNVGRGMVITSEEA
ILENEKKLTHWTPNTYRFGTYADDYRTVVKGHSEKNLSQINTFVVDIDSKENHQGEIILA
CLDQVGYMPTLILESDHGYQVYFVLKTPGYVTKKSNFKVIDVAKKISKTIRLQLAEKLSG
VDLGCNHFGIARFPQENNIVFKEMNYQYSFADWIQWSMKLESDQKTKEDRERKLIVFPEK
KEIRQVDEPWFDMLLHKANIVGGEGRLGRNNVIFTLSLAYYSSGYALDTCEYNMFTFNER
LQEPLSEAELVKIVRSAYSGNYQAASREFIIELCQQWVSPTLKNNDLFIQRRGWWKFKKP
RDQRKYSHKNEWKEDLLAYLSEKSLASEPYLNLSKKELASQLTMPKRTLDKILNELREEN
KVFYKVTRGRNGGMIIASVKTLFARVIQLSKEKRLDYSTRITEVFGLNESLVEETFRQLS
TPLNPLKEVNLFEVDTG
>rep2_2_repR(pEF1)_DQ198088
MLSEIYSAILKNGLRTYKYRNSTMKPAGHIDSSRSGAIFAYLSKQLMNVGRGMVITSEEA
ILENEKKLTHWTPNTYRFGTYADDYRTVVKGHSEKNLSQINTFVVDIDSKENHQGEIILA
CLDQVGYMPTLILESDHGYQVYFVLKTPGYVTKKSNFKVIDVAKKISKTIRLQLAEKLSG
VDLGCNHFGIARFPQENNIVFKEMNYQYSFADWIQWSMKLESDQKTKEDRERKLIVFPEK
KEIRQVDEPWFDMLLHKANIVGGEGRLGRNNVIFTLSLAYYSSGYALDTCEYNMFTFNER
LQEPLSEAELVKIVRSAYSGNYQAASREFIIELCQQWVSPTLKNNDLFIQRRGWWKFKKP
RDQRKYSHKNEWKEDLLAYLSEKSLASEPYLNLSKKELASQLTMPKRTLDKILNELREEN
KVFYKVTRGRNGGMIIASVKTLFARVIQLSKEKRLDYSTRITEVFGLNESLVEETFRQLS
TPLNPLKEVNLFEVDTG
>rep3_1_rep63A(pAW63)_BTH011655
MNTVQKAIELILHKGLRKYKSKNSKAGLVSIAHQEKFESKVLNGKKNKKGSIFITRKKED
LSAKFGTRGVVLSSEEAVLDHVGQASHWTPNVYNFGTYGQNGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMTAINDVALNAGFGVPTMILETTKGYQVYYVLDKAVYVSNNKNFIAIKSA
KRISQNLREMFAESLPNVDLTCNHFGFFRMPSVQNVVMFFEENVYTFKELQEWSKRQDDN
KGNEQFHNVIESPFAKNTPVEQPKQMDELWFKQVISCTNVSPKQTKAGRNNAIFTLSLAC
FQSQYAIKDTMDLMDQFNSNLEQPLDHTEVRGIVMSAYSGKYQAAHKDYIERLLQTYGVG
GQASAFRAPSVLWKKHKKQRKDRVRSHWHEWEADIITFLSMNSKNKPVLYFTQSELCEAL
NIPRSTLNTVLKKSTKIHKTVEGKGKTAKTGFSTIGMLIAFALKENGKRRESYLNYLQGL
FPQMGNILGQAKTSNAIEEQETLYSILEGLPAG
>rep3_2_rep165(pBMB165)_DQ242517
MNTVQKAINLILHKGIRKYKSKNSKAALVSITKQEKFEDKMLNGKKNKKGSIFITRKKAD
LSAPFGTRGVVLTSEEATLDHVGQASHWTPNVYNFGTYSENGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMKAINDVALNAGFGVPTMILQTTKGYQVYYVLDKAVYVTNKKNYIAIKSA
KRISQNLREMFAESLPQVDLTCNHFGFFRMPSEENIIMFFEENVYSFKELQDWSKRQDDN
KGKEFFAIPGENNVIETPFSKNKPVEQPKQVEEAWFKQVINCTNIAPQQTKAGRNNAIFT
LSLACFQSEVSIKETLDMMDQFNSNLEQPLDHVEVRGIVMSAYSGKYQAAHKDYIDRLLQ
TYATPEQVNSFRSPAAFWRKHKKKREDRVRSHWHEWEADIIAFLSINSKNKPVLYFTQKE
LCEAINIPRSTLNTVLKKSNKIYKTVEGKGKTAKTGFSTIGMLISFALREKGQKRESYLI
YLNELFPQMGNILLQAKNNSAMAEETALYSLIEGLPAG
>rep3_3_rep(pBT9727)_CP000047
MNTVQKAINLILHKGLRKYKSKNSKAALVSITKQEKFEDKMLNGKKNKKGSIFITRKKAD
LSAPFGTRGVVLTSEEAALDHVGQASHWTPNVYNFGTYSENGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMTAINDVALNAGFGVPTMILQTTKGYQVYYVLDKAVYVTNKKNYIAIKSA
KRISQNLREMFAESLPQVDLTCNHFGFFRMPSEENIIMFFEENVYSFKELQDWSKRQDDN
KGKEFFAIPGENNVIETPFSKNKPVEQPKQVEEAWFKQIINCTNIAPQQTKAGRNNAIFT
LSLACFQSEISIKETLDMMDQFNSNLEQPLDHAEVRGIVMSAYSGKYQAAHKDYIDRLLQ
TYGTPGQVNSFRSPAAFWRKHKKQREDRVRSHWHEWEADIIAFLSMNSNNKPVLYFTQKE
LCEAINIPRSTLNTVLKKSNKIYKTVEGKGKTAKTGFSTIGMLISFALREKGEKRESYLS
YLNELFPQMGNILLQAKNNSAMAEETVSYSLIEGLPAG
>rep3_4_CDS38(pOX2)_NC002146
MNTVQKAIELILHKGLRKYKSKNSKAGLVSIANQEKFESKVLNGKKNKKGSIFITRKKED
LRAKFGTRGVVLSSEEAVLDHVGQASHWTPNVYNFGTYGQNGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMTAINDVALNAGFGVPTMILETTKGYQVYYVLDKAVYVSNNKNFIAIKSA
KRISQNLREMFADSLPNVDLTCNHFGFFRMPSVQNIVMFFEENVYTFKELQEWSKRQDDN
KGNEQFHNVIESPFAKNAPVEQPKQMDELWFKQVISCTNVSPKQTKAGRNNAIFTLSLAC
FQSQYAIKDTMDLMDQFNSNLEQPLEHTEVRGIVMSAYSGKYQAAHKDYIERLLQTYGMG
QASAFRAPSVLWKKHKKQRKDRVRSHWHEWEADIITFLSMNSNNKPVLYFTQSELCEALN
VPRSTLNTVLKKSTKIYKTVEGKGKTAKTGLSTLGMLIAFALKENGKRRESYLNYLQGLF
PKTGNILEQAKTSNVMEEQETLYGILEGLPAG
>rep4_1_CDS2(pCRL291.1)_NC002799
MAKKQNYIWQNDRNFALDKYEQQQYYYVVESNDLISKAKHDLTTNQLKIIDFLISKIKPD
DKDFEELETSMYELTNVLEIKRSGRTYNQIANTLDDLRKKEVTIYNQERESIVRTGWVSS
AEYFKNGKVILSFDKKLAPYLLDLSKNYSQYLLIDTVKLKSKYAILLYKLMREADRDNGK
SITILQGTPEEFKDWLGAPKNYNYGRLKENVLKKAIEEINLKIDDMNLEILQGRYGRKVV
QVEIHNNWTVQRATKENTEYVESISTHDWLNGDSK
>rep4_3_ORF(pMBB1)_EFU26268
MISMFERKVIMAKKQNYIWRTDRNFALDEYEKQQYYYVVESNDLITKARHDLDARELKIM
DYVVSKIKPDDEDFNIVQTSMYELTNVLNLKRNGRTYSQLAESLESMRAKSVRVYNEVEK
RLTLTGWFEVVDLWENGKIQLKINKQFAPYLLQLKHDYTQHLLIDTVKLKSKYSILLYKL
MREADKDKGKSIAILQGTPEEFKEWLGAPENYDYNRLKENILKKAVEEINLKIDDMDLEI
LQGRYGRKVVQVEIHNNWTVQRATEENSKYVESISTHDWLNGGK
>rep5_1_rep(pMW2)_NC005011
MTGETVVYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLRLSFDELKKLSNYSPET
RNINRFANDLDNVYKKMLNLTIRYEDDDVIERFVLFNHYRIHKREQYLEISTSSNLKHIL
NSITNNFTKFELKEMTRLKSTYSKNMFRLLKQYKHTGYLKIHIDDFKNRLDIPKSYRMTD
INKNVFKPIIIELGSIFNNLTINKIKAKKGRKIEWIEFTFDAEKRIHNKRQPQMSKIDKS
RQYVRREKTPKWLEERSYEKQPQKDYDPQLEKEREDFLKQLELNWE
>rep5_2_rep(pN315)_AP003139
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRFSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQ
>rep5_3_rep(pWBG752)_GQ900394.1 (frame 1)
MTGETVVYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLRLSFDELKKLSNYSPET
RNINRFANDLDNVYKKMLNLTIRYEDDDVIERFVLFNHYRIHKREQYLEISTSSNLKHIL
NSITNNFTKFELKEMTRLKSTYSKNMFRLLKQYKHTGYLKIHIDDFKNRLDIPKSYRMTD
INKNVFKPIIIELGSIFNNLTINKIKAKKGRKIEWIEFTFDAEKRIHNKRQPQMSKIDKS
RQYVRREKTPKWLEERSYEKQPQKDYDPQLEKEREDFLKQLELNWE
>rep5_4_rep(SAP047A)_GQ900405.1 (frame 1)
MTGETVVYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLHLSFDELKKLSNYSPET
RNINRFANDLDNVYKKMLNLTIRYEDDDVIERFVLFNHYRIHKREQYLEISTSSNLKHIL
NSITNNFTKFELKEMTRLKSTYSKNMFRLLKQYKHTGYLKIHIDDFKNRLDIPKSYRMTD
INKNVFKPIITELGSIFNNLTINKIKAKKGRKIEWIEFTFDVEKRIHNKRQPQMSKIDKS
RQYVRREKTPKWLEERSYEKQPQKDYDPQLEKEREDFLKQLELNWE
>rep5_6_rep(pRJ9)_AF447813.1 (frame 1)
MSGETVVYQNEMNLVPLRKFTSTEIDIFFSLCNKLKEQDIKELTIPFEELRHLSNYYHRS
LKRFVKDLEHVYDKMLSLTYTERSGLSFKKFVLFTGYEVNVDEQELIVSINPKLKHVLNE
ITADFTKFELKEMTHLKSTYSKNMFRLLKQYKHTGYFKIQVDDFRERLDIPKSYRMTHIN
QKVLTPIINELSFIFNNLNINKIKAKKGRKIEWLEFTFDAEKRIHNKRQPQMTNIGKSRQ
YISREKTPKWLEERTYEKIPQREYDPQLEKEREAFLKQLEMNWEE
>rep5_7_rep(pJE1)_AF051916.1 (frame 1)
MLDIRYTIRTETKIKKFVLFYKYEIDISEKYLEIATSPDLKYILNSITDNFTKFELKEMT
HLKSTYSKNMFRLLKQYKHTGYMKIKIEDFRERLDIPESYRMSNINQFVLTPIIKELSPI
FSNLNINKVKAKKGRKIEWLEFTFDAEKRIHNKRQPQMANIGKSRQYISREKTPKWLEER
TYEKPTQNEYDPQLEKEREAFLKQLQVDWEE
>rep6_1_repA(p703/5)_AF109375
MSDKSELAVKYQNELNLVPLKNFNAKQMDLFFALCARMKDKGVENIRFSFEELKELSDYK
MTATKAFVADLEKLYKDMLNLSYRTENDDEIEYFVLFNGFKIDKKQKFVEVRVNQDLDYI
INGLTTEFSRFELSAFTSIRSTYAKTLFRLLMQYRSTGYYVVSIEDFRELLDIPEYYQMG
NIDQKVLKPAMKELHNYFENLEVTKIKAKKGNKIAKLEFTFTGLKTNKPSVTMHDWVNGE

>rep7_1_repC(Cassette)_AB037671
MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWK
>rep7_2_CDS2(pC221)_NC002129 (frame 1)
MSTENHSNYLQNKDLDNFSKTGYSNSRLSGNFFTTPQPELSFDAMTIVGNLNKTNAKKLS
DFMSTEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLTHEEML
WLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTIFYGRNGKPETKYFGVRD
SDRFIRIYNKKQERKDNADVEVMSEHLWRVEIELKRDMVDYWNDCFDDLHILKPDWTTPE
KVKEQAMVYLLLNEEGTWGKLERHAKYKYKQLIKEISPIDLTELMKSTLKENEKQLQKQI
DFWQREFRFWK
>rep7_3_CDS1(pCW7)_J03323 (frame 1)
MSKNNHANHSNHLENHDLDNFSKTGYSNSRLNRHTMYTPEPKLSFDAMTIVGNLNKNNAH
KLSEFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTHE
EMLWLKQNIIDYMEDDGFTRLDLAFDFEYDLSDYYAMTDKSVKKTIFYGRNGKPETKYFG
VRDSDRFIRIYNKKQERKDNADIKIMSEHLWRVEIELKRDMVDYWNDCFNDLHILQPDWK
TIERTSDRAMVFMLLNDEEEWGKLERRTKNKYKKLIKEISLIDLTDLMKSTLKANEKQLQ
KQIDFWQREFRFWK
>rep7_4_repD(pK214)_NC009751 (frame 1)
VHSVHPQNPKLSFDAMTIVGNLSRDNAQKLSSFMSIEPQIRLWDILQTKFKAKALQEKVY
IEYDKVKADTWDRRNMRVEFNPNKLTHEEMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLS
DYYAMTDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADVEVMSEHLWR
VEIELKRDMVDYWNDCFNDLHILKPDWTSPEKLNEQAMVYMLIHEEGKWGELNKRTKYKY
KKIIKEISPIDLTEIMKLTLRENEKQLQKQIDFWHREFRFWE
>rep7_5_CDS1(pKC5b)_AF378372
MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEEDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWK
>rep7_6_ORF(pKH1)_SAU38656
MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
FCCKVEFIV
>rep7_7_rep(pKH7)_NC002096
MSKKEQEIYVNLENVKSSKTGYSNSRLSGQTLGKSQPELSFDAMTIVGNLNKTNAKKLSD
FMSIDPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTSEEMLW
LKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTVFYGRNGKPETKYFGVRDS
DRFIRIYNKKQERKDNADVEVMSEHLWRVEVELKRDMVDYWNDCFNDLHILKPEWTTLEK
INEQAMVYTLLHEQSMWGKLSKNTKTKFKKMIREISPIDLTELMKSTLKANEKQLQKQID
FWQREFRFWK
>rep7_8_CDS4(pS194)_NC005564
MSKKAEEIQAKQSLEKENSNFSKTGYSNSRLNRHIMYTPEPKLHFDAMTIVGNLNKNNAH
KLSEFMSIAPQIRLWDILQTKFKAKALQEKVYIEYDKVKADAWDRRNMRVEFNPNKLTHE
EMLWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKSVKKTIFYGRNGKPETKYFG
VRDSDRFIRIYNKKQERKDNADIEVMSEHLWRVEIELKRDMVDYWNDCFNDLHILKPDWS
SLEKVKDQAMIYMLIHEESTWGKLERRTKNKYREMLKSISEIDLTDLMKLTLKENEKQLQ
KQIEFWQREFRFWE
>rep7_9_CDS3(pUSA02)_NC007791
MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKKERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWK
>rep7_10_repC(pKH17)_NC_010284.1 (frame 1)
MYKNNHTNHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAH
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWK
>rep7_11_repD(pTZ4)_NC010111.1 (frame 1)
MSTENHSNYLQNKDLDNFSKTGYSNSRLSGNFFTTPQPELSFDAMTIVGNLNKTNAKKLS
DFMSTEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLTHEEML
WLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTIFYGRNGKPETKYFGVRD
SDRFIRIYNKKQERKDNADVEVMSEHLWRVEIELKRDMVDYWNDCFDDLHILKPDWTTPE
KVKEQAMVYLLLNEEGTWGKLERHAKYKYKQLIKEISPIDLTELMKSTLKENEKQLQKQI
DFWQREFRFWK
>rep7_12_rep(SAP060B)_GQ900417.1 (frame 1)
MSKNNHTNHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWK
>rep7_15_rep(pS0385-2)_AM990994.1 (frame 1)
MAKITKNEQENSVKNYTKKPAYSNSRLNRHIMYTPEPKLHFDAMTIVGNLNKNNAHKLSE
FMSIAPQIRLWDILQTKFKAKALQEKVYIEYDKVKADAWDRRNMRVEFNPNKLTHEEMLW
LKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKSVKKTIFYGRNGKPETKYFGVRDS
DRFIRIYNKKQERKDNADIEVMSEHLWRVEIELKRDMVDYWNDCFNDLHILKPDWSSLEK
VKDQAMIYMLIH
>rep7_16_repD_AY939911
VHPQNPKLSFDAMTIVGNLSRDNAQKLSSFMSIEPQIRLWDILQTKFKAKALQEKVYIEY
DKVKADTWDRRNMRVEFNPNKLTHEEMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYY
AMTDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADVEVMSEHLWRVEI
ELKRDMVDYWNDCFNDLHILKPDWTSPEKLNEQAMVYMLIHEEGKWGELNKRTKYKYKKI
IKEISPIDLTEIMKLTLRENEKQLQKQIDFWHREFRFWE
>Rep7_17_repC(pS0385-1)_AM990993.1 (frame 1)
MSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRDEMIWL
KQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFGVRDSN
RFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWKTIQRT
ADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQKQIDF
WQHEFKFWK
>rep7b_1_repJ(pC223)_NC_005243.1 (frame 1)
MSKNNYTNHSNHLENHDSDNFSKTGYSNSRLDAHFVCTSNPKLSFDAMTIVGNLNKNSAK
KLSDFMSLDPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTHD
EMLWLKHNIIDYMEDDGFTRLDLAFDFEDDLSDYYALSEKALKRTVFFGTTGKAETKYFG
SRDSNRFIRIYNKKKERKENADVDVSAEHLWRVEIELKRDMVDYWNNCFNDLHILKPAWA
TLESLKEQAMVYLLLHEESKWGELHRNSRRKYKQIIQEISSIDLTDLMKSTLKDNEENLQ
KQINFWQRKFEFWK
>rep7b_2_pVGA_NC_011605.1 (frame 1)
MSENIQENHSKQGTSGEVTNYTRTGYSNSRLDAHFLCTSHPKLSFDGMTIVGNLNKNNAE
RLSKFMSIEPQIRMWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLSHD
EMVWLKRNIINLMEDDGFTRLDLAFDFEDDLSDYYAMSDKALKKTVFYGIDGKPETKYFG
VRDSERFIRIYNKKKERKDNADIEIDSEHLWRVEIELKRNMVDYWNNCFDDLHILKPAWA
TLESVREQAMVYLLLHEESAWGELHRNSRRKYKQLLQEISPIDLTNLMKLALKENEKQLQ
KQIDFWLSDFRF
>rep7b_3_SAP089A_GQ900440.1 (frame 1)
MAKITKNEQENLVENYTKKPAYSNSRLDAHFVCTSNPKLSFDAMTIVGNLNKNSAKKLSD
FMSLDPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTHDEMLW
LKHNIIDYMEDDGFTRLDLAFDFEDDLSDYYALSEKALKRTVFFGTTGKAETKYFGSRDS
NRFIRIYNKKKERKENADVDVSAEHLWRVEIELKRDMVDYWNNCFNDLHILKPAWATLES
LKEQAMVYLLLHEESKWGELHRNSRRKYKQIIQEISSIDLTDLMKSTLKDNEENLQKQIN
FWQRKFEFWK
>rep8_1_EP002(pAM373)_NC002630
MRNTIMSNFTFIKSERAYEAKFFQFPQILLYGDNYKHLSDSAKLGYMVLRDRLDYSLKNN
WIDEENNVYFIFTNKELKTLFNWSNDKLNKVKKDLEKAGLLYQKNMGFDPVKRKNIPNRL
YLADLEVTAKDVYLKTTESLDISGNPKIGHRTISAESLDISGNPKIGHRTISAESLDISG
NPKIGHNLYNTITIDTYKDTVIDTTKEELQHRELLEFFSETQDQTFLDKRCLELIALFSN
TIQEAHNAVGIIIRAKNKQEKKYGRVLIAEDWQEEIETTLRKVYHKIKTDAKIKNVDNYM
FGAFCTTFENCLLQLQSWEQKNDSQTVVTLHDWLEGND
>rep8_2_repA(pEJ97-1)_AJ49170
MSESKFYKSKQVYGETFFQLPKVLFTNKKYKKMSSDAKIAYALLKDRFTYSIKNNWIDNE
DNLYFIFTNEELMTLLDVGNQKVVKVKKELEKVELLLQKRMGLNKPNRLYLLRPEVEATD
VYLQSIAENVDNSGNVKITLPKIVDNSGNVKITLPESETNTPLKSLDNTGNVKITHNLYK
ELTTDTYKDTVVDTTKEELQQRELLQSFSETQDHTFLDKRCLDLIALFSNTIQEAHNAVG
IIIRAKNKQEKKYGRVLIAEDWQEEIETTLRKVYHKIKTDAKIKNVDNYMFGAFCTTFEN
CLIQLQSWEQKNESQTVVTLHDWVEKK
>rep9_1_repA(pAD1)_L01794
MNNFKFFNVNRIYNELFYQFPKVLIASDKYKKMSDSTKIAYMLLKARLEFAVQRNQVDEN
GNVYFTFTISELGEVLDCGKQKVLAIKSQLEEYGLLYQKQMGFNKTLGKNNPNRLYLAEL
EVTENDIYQLQTFDDTMQENVDKSERMKIIPTPQRKTNAESLGNQEGMKIIPCQNVDKSE
GMKISTVFNNLNTDTIDTIDTEKERLQQQLLLDQFSEVQENTFLNKDSLKFIAAFSNTIQ
EAHEQVGTIIRAKTKVEKEYNLVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYKS
FYNLFVECALEKKSQLNKKSNSNTPGVITHNWVENQ
>rep9_2_prgW(pCF10)_AY855841 (frame 1)
MENFQFYKSKEIYREKYYQMPKVFFTNEMYKSLSNDAKIAYMLLKDRFDNSVKNNWVDSE
DNIYFIYTVAELMTLLNCREGKVSKIKKELEAVNLLKQKKGRVKKMNGKIETTPNLLYLG
KPNVTSEDVFKINEEQNNVNPVIAKIANTEKVNDINENPVIAKIANTEKVNDINENPVIA
KIADNLFYTSYLDTLDTLDTKKEALQQQLLLDQFSEVQENTFLSKDSLKFIAAFSDTIKE
AHEMVGTIIRAKTKVEKEYNVVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYKSF
YNLFVECALEKENVKNRDNSKGSEITLHNWLEK
>rep9_3_repA(pPD1)_D78016 (frame 1)
MENFQFYKSKEIYREKYYQMPKVFFTNEVYKSLSNDAKIAYMLLKDRFDNSVKNNWVDSE
DNVYFIYTVAELMTLLNCREGKVSKIKKELEAVNLLKQKKGRVKKINGKIETTPNLLYLG
KPNVTSEDVFKINEEQNNVNPVIAKIANTEKVNDINENPVIAKIANTEKVNDINENPVIA
KIADNLFYTSYLDTLDTLDTKKEVLQQQLLLDQFSEVQENTFLSKDSLKFIAAFSDTIQE
AHEQVGTIIRAKTKVEKEYNIVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYKSF
YNLFVACALEKENINNGNKSKGSEITLHNWIEQ
>rep9_4_repA2(pTEF2)_AE016831
MNDFQFISANETYRNLYYQLPKVLFTSEFYKTMSNDSKIAYAMLQDRCEYSIQNNWIDQD
GHIYFIFTRNELMDILGCKENKIAKIKKELKDKNLLYEKRIPPKKLSTGEFKNYPNRLYL
GKLEVSATDVYAISNASYTNEFPESGKNQPSDKHDKIGVSFESGKNQRPEESNNTSTLFE
SGKNQPNLYLTNSLDTIDTIDTEKERLQQQLLLDQFSEVQEHTFLSKDSLKFIAAFSDTI
QEAHEMVGTIIRAKTKVEKEYNIVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYK
SFYNLFVECALEKENINKGNNSKGSEITLHNWVENK
>rep10_1_repL(pE5)_M17990 (frame 1)
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKTGVLMLNPELL
MRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD
>rep10_2_CDS1(pIM13)_M13761 (frame 1)
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKTGVLMLNPELL
MRGDDQKQKYLLLEFGNFEQEANEID
>rep10_3_ORF(pNE131)_NC001390
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKTGVLMLNPELL
MRGDDQKQKYLLLEFGNFEQEANEKQENALYLIIILSRTSIT
>rep10_6_rep(SAP093B)_GQ900442.1 (frame 1)
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATVREIAEGTNTSTKTVNTTLKILEEGNIIKRRTGALMLNPELL
MRGDDQKQKYLLLEFGNFEQEDDQKQENALSEYYSFKE
>rep10b_1_rep(pSK3)_NC001994 (frame 1)
MKERYGTVYKGKEEFINKDSGEVIQFDKLYRAQTGGNFVKMYMELFGQMLGLMNKRGEVM
QYLFKDLNLSSNTVIKTVRELAKETNTSTKTVTETLKIMEKGNIIKRKTGVIMINPALLM
RGDDSKKRYLLLEFEQFDRENELEHALNEYESFK
>rep10b_2_rep(pSK6)_SAU96610
MKERYGTVYKGKEEFVNKDSGEVIQFDKLYRAQTGGNFVKMYMELFGEMLGLMNKRGEVM
QYLFKDLNLSSNTVIKTVRELAKETNTSTKTVTETLKIMEKGNIIKRKTGVIMINPALLM
RGDDSKKRYLLLEFEQFDRENELEHALNEYESFK
>rep11_1_repA(pB82)_AB178871
MANEIVKYHHELNTIPLRKFTPVEMNLFFSIVSRMREKGDKTVRFTFDQLKDLSNYKATA
NVRFVEDLKATYEKILSLRFGRRSESGLSYDMFVMFTEFKINGDVENPYVDIRIYEKALP
LLNNLDEWVRYSLQQFNELQSGYAKTMFRLLKQYRTKGFAYFSKEDFLELLDIPKSYKQP
DIDKRVIKPIRQELTAIFKGLTIKKKYGKGRGKPVIGYQFTFKPEIKKADDFNKHAPTKE
DQNKALALADKQKEYEEPATTINEKIKQKKRELELLQQIKQLEKEKKALEKQTESALSEK
EKKSLLSDLDNLFQ
>rep11_2_repA(pEF1071)_AF164559
MANELVKYHSELNTIPLRKFTPVEMNLFFSIVSRMREKGDKTVRFTFDQLKELSNYKATA
NMRFIDDLEETYKNLELRFGRRSQSGLTREFFVMFTKFKINGDTDEPYVDIQIFEDALPL
LNDLDSWVRYSLQQFNELQSSYSKTMFRLLKQFRTKGYAYFSKEDFQELLDIPKSYKQGD
IDRTVLQPIKQELTAIFKGLSIKKKYGRGRGKPVIGYQFTFKPEIKNANDFNKHAPTKIE
QSQALSQVNGQKNYEEQLTTLDDKIKEQERRLDLLKQLKELEQNKKDEKSLQIQTENKDR
FTLSKRDKKDILSGLQISINYSKKHIV
>rep11_3_rep(pEFR)_AF511037
MANEIVKYHHELNTIPLRKFTPVEMNLFFSIVSRMREKGDKTVRFTFDQLKDLSNYKATA
NVRFVDDLKTTYEKILSLRFGRRSESGLSYEMFVMFTKFKINGDTPEPYVDIQIFEDALP
LLNGLDSWVRYSLQQFNELQSSYSKTMFRLLKQFRTKGYAYFSKEDFHELLDIPKSYKQP
DIDKRVIKPIRQELTAIFKGLTIKKKYGKGRGKPVIGYQFSFKPEIKQADDFNKHAPTKE
EQNRALAQADKQKEYEQQPTTIDEKILEAKRKVELLEQLKELEKKEKQDTKNQTPTEQKK
SKSDSQLSEKDKQDLLNGLSNFGK
>rep12_1_CDS32(pBMB67)_DQ363750
MEQVKHILEPITEYTSLDVMRFMVHGALYEKSPKNWTMDDRKREMQRERLREVGVVHVTT
GKEQLSTGQSIVVSSFETLERLNNHLTHWTPQVYMWGKANNEGRNFENIRFITCVGVEID
KKISLEEIHYAAAVNNLPSPSVILSTPRGLQWFYVFSTPFLTEKGRKAGRFVSEEIKRAF
VNVMDASEVEEGTTKPIFELEADLGAYSLGYFRIPREDNVLYFNGQALNSEWALAWAKEQ
SRKHKRPAVANTSSSRMYKKVGIMEDPAIQSIINNVFLRGCKGKLGRNNAVFILSLAMKY
EGKTESEIIDKIDEWNSQIKSPLKHTEILRTVRSAMNDKYNAPKKDYVEELAEMRMEFVF
DIRTPAKERLDRQQSHYSEWEQDIIEMVEQQCTSDAPYLCGSLRALAQKIGEESPVGKAM
NKSSLSDVLKVSKKLIVKTNGKKGRNARTYITTRSVLLKSNKHNFKAFLLGKLAFNEEIE
STTLEVQFRGQTSEPEANKNSRNKRSGPGG
>rep12_2_CDS1(plasmid)_AY278324
MEQVKHILEPITEYTSLDVMRFMVHGALYEKSPKNWTMDDRKREMQRERLREVGVVHVTT
GKEQLSTGQSIVVSSFETLERLNNHLTHWTPQVYMWGKANNEGRNFENIRFITCVGVEID
KKISLEEIHYAAAVNNLPSPSVILSTPRGLQWFYVFSTPFLTEKGRKAGRFVSEEIKRAF
VNVMDASEVEEGTTKPIFELEADLGAYSLGYFRIPREDNVLYFNGQALNSEWALAWAKEQ
SRKHKRPAVANTSSSRMYKKVGIMEDPAIQSIINNVFLRGCKGKLGRNNAVFILSLAMKY
EGKTESEIIDKIDEWNSQIKSPLKHTEILRTVRSAMNDKYNAPKKDYVEELAEMRMEFVF
DIRTPAKERLDRQQSHYSEWEQDIIEMVEQQCTSDAPYLCGSLRALAQKIGEESPVGKAM
NKSSLSDVLKVSKKLIVKTNGKKGRNARTYITTRSVLLKSNKHNFKAFLLGKLAFNEEIE
STTLEVQFRGQTSEPEANKNS
>rep13_1_ORF(pC194)_NC002013
MEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKTLEKQKLYKANSCKNRF
CPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVMSDELENEIKRYNNSFRKL
IKRKKVGSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYFTDKRYYISQQEWLDLWR
DVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYLINKSKSL
>rep13_2_CDS39(pSSP1)_AP008935
MEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKTLEKQKLYKANSCKNRF
CPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVMSDELENEIKRYNNSFRKL
IKRKKVDSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYFTDKRYYISQQEWLDLWR
DVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYLINQKVFDVFYKSLKGKQVLVYS
GLFKQAKKKLKNGDLDYLKEIDPTEYIYQIFGSVAK
>rep13_3_rep(pWBG1773)_EF537646
MDKYTEKKQRNQVFQKFIKRHVKEGQMDLIRECNTFLSFVADKTLEKQKLHKSNLCKNRF
CPICAWRKARKDALGLSLMMQYIKQKEDKQFIFLTLTTPNVTVEHLEDEIKHYNDSFRRL
SNRKHFKSIAKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYFTDKRYYISQKEWLNLWR
DVTGISEITQVHVQKIKQNSNKELYEMAKYSGKDSDYLINQKVFDAFYKSLKGKQILVYS
GLFKDARKKLKSGDLDYLKDVDPTEYIYQIFYIWNQREYLASEIYDLTEQEKREINHQMI
DEIEEGN
>rep14_1_CDS2(pEFNP1)_AB038522
MRLNENQGYLKSVGTNGWQLFDQYGEDIAYIEMLKFHPDKGRIDFNPNKIGEFLKGSMKQ
FIHDLFLDAHFSRADIACDILGVPDDFITQYRIVDPVSFKPIYGRSGKLETAYWGSRASE
RQVRMYNKKLEQERKKQIVPKEIETWWRIEMQLRRGKATDWHAMVRESLDSFASPHYLPG
DVKPVDRIMIKGLNQDHSEWAYISRNLKYRLRKLLKEESQNDELTNHLRETFKESANDLK
IELDTWLLGLDVTEK
>rep14_2_ORF(pKQ10)_EFU01917
VRLYNKKLEQERKKVIVPKEIDTWWRLEMQLRRGKATDWHAMVQESLDSFASPHFLPIDI
KPIDKIVIEGLIAEPSNWSIIARHTKYKYRNLLKQESQNDELTNHLRETFKESADELKKE
LDTWLLGLDVTEK
>rep14_3_ORF(pRI1)_EU327398
VNEWEKLNRISNRRLKYQSLTLPLKMQWSIDRITIVGKLKENIYYHTPNDVLILNFEQLM
RLNEGNGYLKAVGNNGWQLLDQHEENIAYIEILKFHEGKGRIDFNPNKINQFLSGSMKNF
IHDLFLEPHFSRADIACDIVDIPDDFVSQYRVVDPVSFKPIYGRSGKLETAYWGSRASER
QIRMYNKKLEQERKRKIVPPEITTWWRLELQLRRGKATDWHEMVHESLDSFASPHYFPPN
TKVTERIMVKGLLYDHSEWGNLAKNTKKKYRDLLKQESQNDELTNHLRESFAESADDLKR
ELDTWLQGLDVTEVGAE
>rep15_1_repA(pLW043)_AE017171
MSKQFFTVEENYKERFYQLPKVFFTNPNYKDLSNDAKIAYAILRDRLQLSIKNNWIDTEG
NIYFIYTVADLEVILNCGNKKITKIKKELENVDLLIQKRQGLNKPNLLYLLKPAITKNDI
YEIDKAENEVEALQDKEVSKGHVQKCQKDTSRNVKRTRLEMSKGHTNDTDFIDTDFIDTE
SNDMNNMNDTNQHSNHSNHFSNIHDKESLKYIELQELPELIKSYINNFSYEEVKSIKSVI
LKAKKSFNNKYDTFYMLEDIDEELLLVLKRFKGYLVKKQEKVANMEGYLMRSIIAELEEM
HSTIMRRKNMENNPLSLFN
>rep16_1_CDS8(pSAS)_BX571858
MKSVKRLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESATEDKQKKESDNINFESKSDAQIVEILKNQINTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNARQNVDAQEKTYTTSPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAQREDVSANPNDNDSDIEEKSEETEAKKGF
WSRLFGN
>rep16_2_CDS6(pSJH101)_CP000737
MKSVKKLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESTTEDKQKKGSDNINFESKSDAQIVEILKNQIDTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNTRQNVDAQEKTYTTNPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAKKEDVPANLNDNDSDIEEKSEETEPKKGF
WSRLFGS
>rep16_4_unknown(SAP056A)_GQ900478.1 (frame 1)
MKSVKRLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDSDIEKIIQRVNENKKKYGF
ESATEDKQKKESDNINFESKSDAQIVEILKNQIDTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLTLESNKKIQKLENQLEKEKHLNYPFDTSTNARQNVDAQEKTYTTNLVKI
NRDQEETKETEIQYKDISGSQSDESTQGKEAQREDVPANPNDNDSDIEEKSKETEPKKGF
WSRLFGN
>rep16_5_unknown(pWBG759)_GQ900401.1 (frame 1)
MKSVKKLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESTTEDKQKKGSDNINFESKSDAQIVEILKNQIDTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNTRQNVDAQEKTYTTNPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAKREDVPANLNDNDSDIEEKSEETEPKKGF
WSRLFGS
>rep16_6_unknown(SAP071A)_GQ900485.1 (frame 1)
MKSVKKLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESTTEDKQKKGSDNINFESKSDAQIVEILKKQIDTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNTRQNVDAQEKTYTTNPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAKREDVPANLNDNDSDIEEKSEETEPKKGF
WSRLFGS
>rep17_1_CDS29(pRUM)_AF507977
MNDFNYYKSKEIYREKYYQMPKVFFTNEKYMDLSNDAKIAYMLLKDRFDYSVKNNWVDSD
DNIFFIFTVEELMKLLQCREGKVSKIKKELEKAGLLKQKRGRVNKRDGKIESMPNLLYLG
KPEVTNQDVFKIMEEEDNTDTTVIAKIANTAKPREINDTTVIAKIANTAKSSHIKDSTVI
AKIADNLFYSNSIDTNRHIIDTETDQLQNQVLLDNFVDIMKEDSINTFVPENVLNLIKTF
SSTYEDAQKTVQTIHNAKKKAEELEQTVVVYEELESYGIDADKGLYMTLLKAYQKQKTEK
VNNLQNLIFVYVKNWFVEKAIAAKLANEQRETFNELPTVSTENWLE
>rep18_1_repA(p200B)_AB158402
MANEIVKYEPELNTIPLRKFTPIEMNLFFSIVSRMRDKGNQKIRFYFSQLKDLSAYKQTA
GEVFIKDLARTYDHLMDLRFGRKSNGGLTIERFTMFTDFEIHGEVDNPYVDIKVHEKALP
LLNNLESWVRFSLTEFRDLNSSYAKTMFRLLKQYRTQGWAEFSKEDFLELLDIPKSYRQT
NINQFVLKPIKEELTPLFKGLTIRKKYGKGRGKPVIGYRFTWKAEINHADDFSKGKQEDL
RIKLFNIEHNGELTQKEKWRAKDRILNLPLGTHEADFKKQQQTEKEEAEKQSISNELKQD
LLENLQNLFD
>rep18_2_repA(pEF418)_AF408195
MSNEIVKYHHELNTIPLRKFTPVEMNLFFSIVSRMRDVGDKKVQFTFEQLKDLSNYKATA
NVRFIDDLETTYDKLMDLRFGRRSADGLQRERFVLFNQFKIDGKADIPFAEIQVHEKALP
LLNNLEEWVRYSLQQFNELESSYSKTMFRLLKQYRTKGFAYFSKEDFHELLDIPKRVLLQ
SFKSTIK
>rep19_1_CDS45(pLEW6932)_NC009130
MSNFNIKEIQKEKFYQLPKVFFTNPKYTNLSNDAKITWSILRDRLDLSIRNNWIDENGDI
FFIYTNEKLKSILNISSPNKLSKIKKELTQADLFNQIRVGLNKPNKLYIKKPEVTEADIY
YISQQENDVESRNDTDVSKSYVQNYDNNTSGNINLIHQDISKSYANDTEFNNTDYIETEN
NDTNDLNDTSNNNLINTHSNHTNYQQNKFNNEALKFQVLEELPQQTRDYLSNFEIREIRI
IKSVLLKGKKSFNNTFNTYYRLEDVEFELVSVLKRFKAMLLQKNETVEAMQGYLMQSIKA
ELEEIHALNMRRQNMPKYNIFNE
>rep19_2_rep(pSA1379)_NC007931
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNAKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRFSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQ
>rep19_3_CDS20(pSJH901)_CP000704
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKEVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQ
>rep19_4_repA(pUB101)_NC005127
VLYIYIKRPNYGNSQVFGNKTSALFVYIVVTFLLYILRIISASRIHINILTTFYYLFLKL
KYERGFSMSNFNIKEIQKEKFYQLPKVFFTNPKYTNLSNDAKITWSILRDRLDLSIRNNW
IDENGDIFFIYTNEKLKSILNISSPNKLSKIKKELTQAGLFNQIRVGLNKPNKLYIKKPE
VTEADIYYISQQENDIEPFNDKDVSKSYVQNYDNNTSRNIDLIHQDVSKSYANDTELNDT
ELNDTELNDTNDLHDTYNNFSINHTHSNQSNQFLNNFGNQDDKEILLQEFPEQLTNYLLK
YDYRDLEIIKTVILKAKKSFNSRHEDMHYMLEDIEDEILISLKRVKKAIHDRGVKGQKET
IISMQGYLMRTILSELEELYSADMRRQNMYNIFN
>rep19_5_rep(pWBG747)_GQ900399.1 (frame 1)
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRKSNVQKFENRTSRSSIFERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQ
>rep19_7_repA(SAP019A)_GQ900385.1 (frame 1)
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNNWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKEVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIKAVI
LKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQTIL
TELEETHALYMRRKNMKQYNIFNQ
>rep19_10_rep(pWBG746)_GQ900390.1 (frame 1)
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQ
>rep20_10_repA(SAP057A)_NC_013334.1 (frame 1)
VNLSGQELPNSQSNDTKLNNTNYIENEDNDTYDMNDIISNTLINNNHHSNHTNHQKTEFN
NDALKFQVLEELPQQLQDYLSKFEIREIRIIKSVLLKGKKSFNTSHDTYYRLEDVEFEIV
SVLKRFKEMLLQKNETVEAMQGYLMQSIKAELEETHALYMRRKNMKQYNIFNQ
>rep20_11_repA(VRSAp)_AP003367 (frame 1)
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKN
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEA
SHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYNDTDYIKTNYNDMYDLNDRKL
TYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRR
DHLPITSLFNQ
>rep21_1_rep(pWBG754)_GQ900396.1 (frame 1)
MQYNTTKYIDENQDNETLKDMTKSGTQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
VLEFKPTDEGYLKLYKTWFCKSKLCPVCNWRRSMKNSYQAQKVIEAVVKEKPKARWLFLT
LSTKNAIDGEHLEQSLKYMSKAFNKLKMYAKVKKNLIGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWINLWQKALQVDYKPVANIKAIKPNKKGDKDIQAAIKETS
KYSVKSSDYLTGNHEKDAEIVQDLEQGLYRKRMLSYGGLLKQKHKLLNLDDAEEGNLIQT
SDEEKTTEEEQKAHSITAIWNFEKQNYFLKNL
>rep21_2_rep(pNVH01)_AJ512814.1 (frame 1)
MQYNTTRYIDENQDSETLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAYNVKQCGN
VLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVVKEKPKARWLFLT
LSTRNAIDGEHLEQSLKHMSKAFNKLKMYTKVKKNLIGFLRSTEVTVSKNDGSYNQHMHV
LLCVENSYFKNKTNYITQEEWVNLWQKALQVNYRPVANIKAIKPNQKGDKDIQAAIKETS
KYSVKSSDYLTGDSEKDSEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKTTDEEEKAHSITAIWNFEKQNYYLKDLKR
>rep21_3_pS0385-3_AM990995.1 (frame 1)
MIKLRRLNQYWRSFYMQYNTTKCIDENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILE
ILKIKKAFNVKQCGNVLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIE
EVVKEKPTARWLFLTLSTKNAIDGDHLEQSLKHMSKAFNKLKMYTKVKKNLVGFLRSTEV
TVNKNDGSYNQHMHVLLCVENAYFRKKENYITQVEWVDLWQKALQVNYRPVANIKAIKPN
QKGDKDIQAAIKETSKYSVKSSDFLTDDDERNQEIVNDLEKGLYRKRMLSYGGLLKQKHK
ILNLDDAEDGNLINTSDEDKTTDEEEKAHSITAIWNFEKQNYYLKDLKR
>rep21_4_repRC(pSK41)_AF051917.1 (frame 1)
SYADILEILKIKKAFNVKQCGNVLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSY
QAQKVIEEVVKEKPTARWLFLTLSTKNAIDGDHLEQSLKHMSKAFNKLKMYTKVKKNLVG
FLRSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQVEWVDLWQKALQVNYRPVAN
IKAIKPNQKGDKDIQAAIKETSKYSVKSSDFLTDDDEKNQEIVNDLEKGLYRKRMLSYGG
LLKQKHKILNLDDAEDGNLINTSDEDKTTDEEEKAHSITAIWNFEKQNYYLKDLKRMQY
NTTKCIDENQDNKTLK
>rep21_5_repRC(pGO1)_FM207042.1 (frame 1)
VVSYIFLLCNRTSYADILEILKIKKAFNVKQCGNVLEFKPTDEGYLKLHKTWFCKSKLCP
VCNWRRAMKNSYQAQKVIEEVVKEKPTARWLFLTLSTKNAIDGDHLEQSLKHMSKAFNKL
KMYTKVKKNLVGFLRSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQVEWVDLWQ
KALQVNYRPVANIKAIKPNQKGDKDIQAAIKETSKYSVKSSDFLTDDDEKNQEIVNDLEK
GLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINTSDEDKTTDEEEKAHSITAIWNFEKQN
YYLKDLKR
>rep21_6_rep(pBMSa1)_AY541446.1 (frame 1)
MQDNHTKYIDENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
VLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQRVIEEVVKEKPTARWLFLT
LSTKNAIDGDHLEQSLKHMSKAFNKLKMYTKVKKNLVGFLRSTEVTVNKNDGSYNQHMHV
LLCIENAYFRKKENYITQTEWVDLWQKALQVNYRPVANIKAIKPNQKGDKDIQAAIKETS
KYSVKSSDFLTDDDEKNQEIVNDLEKGLYRKRMLSYGGLLKQKHKILKLDDAEDGNLINT
SDEDKTTDEEEKAHSITAIWNFEKQNYYLKDLKR
>rep21_8_rep(SAP071A)_GQ900485.1 (frame 1)
MKNSYQAQKVIEEVIKEKPKARWLFLTLSTKNAIDGDTLEQSLNHLTKAFDRVSRYKKVK
QNLVGFMRSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQKALQVDY
RPVVNIKAIKPNQKGDKDIESAIKETSKYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRM
LSYGGLLKQKHKILNLDDAEDGNLINTSDEDKITDEEAKAHSITAIWNFEKQNYYLRH
>rep21_9_rep(pKH12)_EU168704.2 (frame 1)
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAYNVKQCGN
VLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWVNLWQKALQVDYRPVANIKAIKPNQKGDKDIESAIKETS
KYSVKSSDFLTDNDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKITDEEAKAHSITAIWNFEKQNYYLRH
>rep21_10_rep(pKH14)_EU164802.1 (frame 1)
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
ILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEKVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANVKAIKPNRKGDKDIESAIKETS
KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDVEDGNLINA
SDEDKTTDEEEKAHSITAIWNFEKQNYYLRH
>rep21_11_rep(pSA1308)_AB254848.1 (frame 1)
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
ILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANIKAIKPNKKGDKDIESAIKETS
KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKXTDEEEKAHSITAIWNFEKQNYYLRH
>rep21_12_rep(pKH3)_AF151117.1 (frame 1)
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAYNVKQCGN
VLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNHDMHV
LLCVENAYFRKKENYITQEEWVNLSEKRLQVDYRPVANIKAIKPNQKGDKDIESAIKETS
KYSVKSSDFLTDNDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKITDEESKAHSITAIWNFQKQNYYLTH
>rep21_13_rep(SAP101A)_GQ900495.1 (frame 1)
MKNSYQAQKVIEEVIKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVK
QNLVGFMRSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQKALQVDY
RPVVNIKAIKPNQKGDKDIESAIKETSKYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRM
LSYGGLLKQKHKILNLDDAEDGNLINTSDEDKITDEEAKAHSITAIWNFEKQNYYLRH
>rep21_14_rep(pKH21)_EU350088.1 (frame 1)
MQYNTTKYIDENQDNETLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
VLEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVVKEKPKARWLFLT
LSTRNAIDGDTLERSLKHLTESFRRLFKYKKVSKNLIGFMRSTEVTVNKNDGSYNQHMHV
LLCVENSYFKNKANYITQEEWVNLWQKALQVNYRPVANIKAIKPNQKGDKDIQAAIKETS
KYSVKSSDFLTDDDERNQEIVNDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKTTDEEEKAHSITAIWNFEKQNYYLKNLKR
>rep23_1_rep(pPR9)_GU237136.1 (frame 1)
MPKSTTAYRSVRKSHFTQISNDLLNDKTISLEAKGLLSIFLSNNDEWDLHMSEIIKRSKN
GRDAHYTALKKLIKAGYIARLEFKQLSNFQFLHLEYIFSDNKEDVINGIKDAQKFANENE
QIIVLTYKDIEGRKIESSIENTEKKPFTENPDTEENSENSPFTENPDTDNPNTENANTEN
QYNNNTNSNNTNINNTNSNNTNDMNDKQQNTEKDHSYHSNHFSNTHDKESLKYIELQELP
ELSKSYINNFSYEEVKSIKSVILKAKKSFNNKYDTFYMLEDIDEELLLVLKRFKGYLVKK
QEKVANMEGYLMRSIIAELEEMHSTIMRRKNMENNPLSLFN
>rep23_2_rep(pV030-8)_EU366902.1 (frame 1)
MPKSTTAYRSVRKSHFTQISNDLLNDKTISLEAKGLLSIFLSNNDEWDLHMSEIIKRSKN
GRDAHYTALKKLIKAGYIARLEFKQLSNFQFLHLEYIFSDNKEDVINGIKDAQKFANENE
QIIVLTYKDIEGRKIESSIENTEKKPFTENPDTEENSENSPLTENPDTDNPNTENANTEN
QYNNNTNSNNTNINNTNSNNTNDMNDKKQNTEKNHSYHSNHFSNTHDKESLKYIELQELP
ELSKSYINNFSYEEVKSIKSVILKAKKSFNNKYDTFYMLEDIDEELLLVLKRFKGYLVKK
QEKVANMEGYLMRSIIAELEEMHSTIMRRKNMENNPLSLFN
>rep24_2_rep(pWBG749)_GQ900391.1 (frame 1)
MPTKFYNVNEEYREKFIQIPKVFFTNPKYTVLSNDAKIAWGILRDRLELSIKNGWIDTKT
GNIFFYYKNEDLQTILNCKKDKVIKIKKELIEVELLMQVRQGLNKTNKLYLVKPEVTEVD
IYKIQKQENTPDTSDSKEVGKTDFQKSEKSTSRSRKNRPQEVGKTESNDTELSNTELSDI
ELSDMNDMNDNNIKSDEKNTHSNHSHHDSLNYDEEALKFTELQEFPEQSKHYLNNFSYRE
LKIVKEIILKAKKSFNTEHNTTYMLEDIDYDLVNVLKRFKSKVYTKNESVETMQGYLMKC
IKMELEELHSLNMRKKNFKNSSWNIFS
>repUS1__ORF(E.faeciumContig1258)_JDOE
MAASLDVVYSTVLQNGIRKFKYKNSHLKPVSFSDQSGKGAIFAYRSKEHMIEGIGLVITS
EEGVIENNNRFTHWTPNVFRYGTYADEARMFTKGHSEDNLRQINTFFVDFDTLDPNFDYG
EIILASHEIGFMPTMILRTPHGFQAFYVLDKPAYVTKKSNFKVINVAKMISKNLRNKFSN
DYRFPVDVNANHFGITRMPSEENVLFFEPQYRYSFEEWIDWSMREDADKKAEIKNVFVLP
STQEFRQVDEPWFQLLLKSQKIQGEKGVYGRNNVIFTLSLAYFSSGYEVEACELTMLEFN
DRLANPLSDRELTRIICSAYSGKYQAAHREKVVLLCQEWVDANLSEEQLFNKKRGWWKFK
KERAVRKYSHSHEWAEDLLSYLNDQSYEEQPYIISTKKELTERLKIPKRSLDKVLKQLRE
ENKIHFRVRAGRNGGIMLASIHGLMRSVIRLKKESRGAYFAAISEAFGKEYTFIQTALKR
LIDPNKIGVQTDLFMIDTG
>repUS2__repA(pBI143)_BFU30316
MILNRKIIFPLILFLWKIIVYFVENNISQKHIKMENKKAVKLTDFQKKQENPFMKTSYRG
IENHVVKKYKSNSGGDKRAVVALADTETGEVFKTSFIRQIEVDEEQFTKLYLSNFAAFFD
LSQAAIRVFGYFMTCMKPKNDLIIFNRKKCLEYTKYKTDKAVYKGLAELVKAEIIARGPA
DNLWFINPLIVFNGDRVTFAKTYVSEKDFSCPKERRSRETTIITWL
>repUS3__repM200(pBM200)_DQ437521
VNLEKKLAEAEKKARLKDFKNKSYSSEEVSDIQRSLLDLMQEITGEKHFIGKEKDIFAGE
PFNQTMHRNLDLLTRINYLTTAEESFLFRIQAYLEFKSNVIICREDKFKKKRNNVVDDDY
ELPKAATVSEIAEMIGKSREKTSLIMNSLKKKEILLNPEGAGQVSENGRSVSPRTWIVNP
YIMICAPRKNEVKLDKLTMRLFQHSLKNLKDPNGKKVNLPVRFF
>repUS4__repA(pCI2000)_AF178424
MTKSNFKFYQPDDVYGTLFFQFPKVLIYGDKYNKLSSDAKIAYMLLKDKLEFSIKNEWID
EDNYIYFKYSNIALMQIFNYSEKTVIKIKKELESVDLLYQKRMGYNPKTKKNEANRLYLG
ELELSAEDVYKKEKRARDLATSGTVKSTVRSDNPQTLATSGTVKSTVRSNTPQTLATSGT
VKSTAYLYKDILDTSLDNIKDTQELDFSSSNFSEAQLKVQNQDLVKNSKSFLKEGTHELF
LSDEAINLLQMWCNSPQQLRKMVGIILNAKNAVCKENEELGVFFVLEEEALQEKILNTLR
RYFNAIRTKENKITNYENYLFGSMKNMFAEYWNNQALKQRLNSNETNKENLNMDDSVWSN
SNYENETSQNDLARLERIKLEALAKINSKAT
>repUS5__CDS20(pETB)_NC003265
MLNINKVYDFILHGSLEKYKFKNSKATDLERTNFKDTQSKNWKSARIAVTPNKDTLKNGL
GLIIASEEALVQYGYKFSHWTPNPYNYLSKEKSNIADVNTYKVLNRTKDNVKQINTFVLD
VDEDIEYNELVQSLASAHINEGAEMPNLYVKTPRGWHLYFVLDVPFYAKGIEKKAIKVAE
KVHSSLAYAISKYLPVDNQCVSTGYFRLPTKDNVKLFTNQYCSKAYMVRWSKKYSEKNNL
NRNVLYKSIANGHELTPEWVSYLLKEADVTSFGYGVGRNNTMFSVALYYYSKNVDIKEAE
SNIYALNQRLNKPLSHKDIEKVIKSAYSGRYGGAMREHVENLLEAFSDDRIAYSNSGVSI
NGFWKHKKERKDRVRSHFDERKDDLERYLNEHTNKQKVFVKGSMSAIAKKLGMARSSLYA
IFEKHINKGTIIKYTIKNGRYSETFIALKSVYIESLFEMVKSLKNKKESYITAIRQLVSN
ERDTHSLLIQNSELMNEIENTFIYINQHTQCEDGNEILYERFIS
>repUS6__rep(pFL1)_NC002132
MSYKKESKLSNYDKHKENPFLKEAVEQIQHNIVKKYKSTGGTSQSAILQAVNSDGELVGH
TSFIRQIEVDEEQFTKIYLAQFSSFWNLKTQAIRVFGYIMTKLIPRQDTFMFFLDECMEY
TGYKGKNSIYIGLTSLVENNIIARGRNDSHYFINPMVAFNGDRVTFAKLI
>repUS7__rep(pHTbeta)_AB183714
MLNSCEYADVLAKILKNGIKQFNSKNLVAFKKNSNKIGAIAGFTSKTNMIKTKGLIYRSI
DRVLEDSDVLTHWTPNVYSWLGGGENKTIFGHKEANLIQINTFVADIDYPVGEKKTDLNL
LVLYLLEEGLLPTLIVDTPKGYHCYFLIQNYNQETDSFDKASYISNSNDFKSLRVAKRIS
ENIRKSIQNRLPQVDMGCNHFGIFRFPTKKNIVHYEPNFVDTFEGYLKWSKDFEEKEYAL
KRSNLSLLAPNSTGKKGSKRQIDTKWYDFLIHTDIAEGDRNKTIFTLALACKSSGLSIGE
CMDQLDQLQFNNDLSYSEVERTIRSAYRGDYKGAKSSYVNEIIENYATPTEFEKYSINVN
RQAVKRKGNRVDPSNWVKFAKPREERKYSHFEESKADLLAYLERKQRSLKKNELFLSVSM
GTISEETQIPVSTLKVILKELRTANTVILQTSRGRYGSTKIATSKFVEAKILSTVIQNKK
DKQVFVLELLGTANSHVETILRRYEDKTVPFHANILKEREKSKHAPIRGANTG
>repUS8__ORF1(pOg32)_LOPPOG32
MTKTSIEKPAPSNSRLSVKNVYTSSIKWSIDRLTIVGELAPFLPAGYTTNKISGEVKSRI
TIEDMFKVFEHFGHCRLSGNGYQMITDDGENVAYFERLKFDKNKGRLDFNPNKLDSFFEN
GLKQFISDLFITPHFSRADIAADIFDVPDEKVVSYRLGEPVGNTFFYGKSGDLQTAYFGA
RSSEKQIRLYNKRIERIKKGRIEDLKDPEQCYWRLELQLRRGRADDFQKQVDESLKHFYS
PQDFPDDVSVNSRIFLKGLLADPDNWARISRPTKSKYRQIEERVASSDKLTIELKKTFSQ
QNKKIEKELKNWLQTFQVL
>repUS9__rep(pSK1)_AF203376
MSKFKKISASEFETLRFYQLPKFLFEDEYFSKMPTDAKVMYALLKDRFELSRLNNWVDSE
NNIYLLYTNKQLCSILNYAEPKIIKLKKELEKYNLIINERQGLNKPNKIYLLEPTYDKEL
INSKFQNKEFISSRTNKSSVQELINSKSSDTDFNNTEYIETKNNDTNYTNDTSNMISKNS
HSNHTNHQQTEFNNDALKFQALEELPSQIKSYVSNFEIKDIRIIKSILLKGKKSFNNTHD
TYYRLEDVEFELVSVLKRFKAMLLQKNETVETMQGYLMQSIKAELEEIHALNMRRQNIPQ
YNIFNQ
>repUS10__CDS25(pSSP1)_AP008935
MTNEENQKFTKLHKFLFTDNKFKAMRAKSKLLYAIITERQSLTIAYAKNNQDQSQFLDEN
KRLFSIYSNSDLKGMLHVSEPTIINLKKELIEYGLLEEIRVPTSNNRLYPKKPYDKYYYL
NDIDEFYRLPYALFDNPFYNKLSPDAIITYAIYLSRYEYSVFKDIFYDKTHNIYCVMPNQ
EIAKFLNINRKKVARLKNELIAYGLIEVKPSKRADKLYVNPPKQRNDNKLKKWDIANLKN
GTLQTKDMGHCKLKKWDASYTDFSNTNISVIDSNDMNDMNDIREANIEDTKPNQPNHTDH
LQKQSDEEALKHLELQEMPEDTKRYMNNFSAKEIQIIKSVILKAKRSFNDLYGEVYMLED
MDDELFTVLKRFKGIMVKKQEKLENMQGYLMRSILSELEEMRSTNMRRKNFENSPLNVFK
S
>repUS11__CDS16(pTEF3)_AE016832
MKVSDVISVILKSGIREYKYLNSKIKPIGYKAEGKKGAIFGFRSKELMTESRGIVLTSQE
ALAENEDKFTHWTPNVYSYGAYADDNRTIVKGHNERNLQQINTFVIDFDRSLGEILDSQM
ILDAAIDLELMPTLILETPGGFQAYFILENAWYISSKNNYQSIEVAKRVSENLRKAFAEV
LPSVDLGCNHFGIARIPRTDNVVYYYPALTHDMQQLIQWSMKFEPKRTHKKPNLNVVAVK
MNQIKEQWVKVLIDNPQVVGTKGKLGRNNVIFTLSLAYYASKIEQDRCFDDMDVFNSSLN
YPLSVSEIKRIVKSAYSGKYKGASKTYVQELVSNWGLESLSEEKMFTQQRNTWYKFKKER
HKRKKSHLSEWKKDILDYLETQCYRYRPEVSMKKTDLQAAVTFNGQSIPKRSLDRALQEL
VAEGKLFVQTKAGRGGGLVVATRKALIRTVIQVKQQVKYAYKQGIKTFFKEADMLVRLFE
QTDKNSQRAREYKQLKLWNTG
>repUS12__rep(pUB110)_AF181950
MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDYFELLHILEFKKAERV
KDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGIQSQKVVAEVIKQKPTV
RWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMTQYKKINKNLVGFMRATEVTINNKDNSY
NQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQS
AIDETAKYPVKDTDFMTDDEEKNL
>repUS13__CDS1(pUSA01)_NC007790
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
ILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEKVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANVKAIKPNRKGDKDIESAIKETS
KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDVEDGNLINA
SDEDKTTDEEEKAHSITAIWNFEKQNYYLRH
>repUS14__repA(VRSAp)_AP003367
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKN
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEA
SHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYNDTDYIKTNYNDMYDLNDRKL
TYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRR
DHLPITSLFNQ
>repUS15__ORF(E.faecium287)_NZAAAK010000287
MTDFNFFKADRVYNELFYQFPKVFIVSDEYKKMKDSTKIAYMLLKARLEIAISKRQIDEE
GNVYFTYTTNELCSVLNCQKQKAIAIKKELESFGLLLQKQMGFNKQLGKNNPNRLYLAEL
KVSENDIYLLEKFDRENRENVDKSEGMKIIPTLDEKSDAESLGAQEGMKIIPCQNVDKSE
GMKIIPELNNNILDTNRHNIDTEKDRLQDQLLLDNFETIMTNDSIATFIPERVLNLIKTF
SSSYSEAQKTVQTIHNAKKKAETESGISIIFEELDSYYVNAEQELYTTLLKAYQKLKTEK
VENIQNLIFVYVKNWFIEKPIAAKVSSEKRLNSESFPKTITKDWLE
>repUS17__rep(pKKS825)_FN377602.2 (frame 1)
MTEVVKYHNDLNTVVMRSWKPVEMNIFFGIIAKLRDKDTRKIIFSTDELREMTDTAGNKN
LKRWNKAMIDVSQKVSQLNYYYEDEERYVLMMLFSMFEVNKKEQTLTIQVSEHFDYVLNQ
LNATFTSYELREFTELRSSYSKSMYRLLKQWRTVGKKRFSVDEFSILLDVPKSYSKGMID
RQIINPITEELSNFFNNLKVKKIKENTQGNPITHYEFTWIPEKTGKWINNNTIRNRLVQV
KRFVRKNFQIGQKRTIFNQRKPCFLKKNRTN
>repUS18__rep(pKKS825)_FN377602.2 (frame 1)
MSNNIKNKKKNYREVEELLAFHYQEIEGEEFYKYIFPNNQDEGEMSGDYSKPNAIYLYKD
PKDEGTERKLRRRIMLNDTWEEDYREFVEDNPMTLCSGLAYRGRINRLEYSQQMNALVFD
LDAVGKNELINFFSRIGKKPGLRTLPQPTFIVMSGTGLHIYYVFKEPIALYPNIKLQMKQ
LKYDLTFKMWEYKATSQEKQIQYQSINQGFRMVGSRNDKYDLPVKAFKTGERVTLDYINS
YADEEKNRVDINKRFRPTQYSLEEAEEKFPEWYERVIVQGDKRAKRWDIKRDLYDWWLRQ
SYKVKGGHRYFYLMCMAIYAVKCNIPKNEVREDMYKIFDELKEIEHSNPLEEDDIKSALE
TYDRQYYNFTIDDIVKLTDIPIEKNKRNYRKQDQHLKLARGQLELLKEMGEVEVGRPSKE
SLVREYLEDNPEHSPTEIARNLGISRTTVYKYI
>repUS19__rep(pDLK3)_GU562626.1 (frame 1)
MANNTEKDTRSKTWNLIVYPESAPEGWKELLVEDGISFVCSPLHDKDILPTGEIKKAHWH
ILLCFSSNKTFKQVLEVSERLNSPIPQKSKSTGGSIRYMIHIDSPDKVQYKKSDIEVYGN
IDIEQYFRITSTERYDLIREMIDFVRENEIDEIQDLIDYAMINRFDDWFPLLCDNSTFIM
SNYIKSIRHRKKRF
>repUS20__rep(pAVX)_CP001784.1 (frame 1)
MSQSLRFTKLYKFLFEDPTFKTLPAKAKLLYALISERQSLSKANAKQHGIQSQFIDNEGR
LFSIYTNQELMTKLNMSKPTVIKLKKQLIEFGLLEDVRLGNNQPNRLYPKKPYDNYFYAY
DVDEFYRLPHALFENPKYQSLAAESIIAYAIYLSRYEYSIYKNHFSDENGAVYCCFSNDN
MANILDVSTRKVERIKKELIVSSLMINKRASFGKSNRLYISLPKASDDKEVKKCRTSYTY
FSYTYSSDIDSNDMNDTYDNNIDEVHEINDSPQTNHSSHPNHQHNTEDTFNDQQVEQEML
LQHLPDYVQLNLKHFSNTEIRCIKSVLNKAKASYNHHAPVDERVTYEACTYAIGEALRRI
KLLSRQKNENICDLEAYMMQTFKRVFVEHVLNDQQKLDDTKTKTHDISQFEPKNAFQSMA
KRMFLDV
>repUS21__rep(pWBG764)_GQ900468.1 (frame 1)
MTHNNINNRKIQDIERYESKKVRSEEFRDLVKSLVSDSYYWLIEECGTFLSFVGDKELNK
IKMHRGNFCKHRFCPMCAWRKARKDALELSLMMQDIKISYDKAFIFLTLTTPNVVAERLG
DEIKRYNKSFDKLFKRKVVKRVVKGYVRKLEITYNEKRDDYHPHFHVLIVVNKSYFTDVK
AYLNQKEWLRLWREATGISEITQVDVRRVKEQNSNELYEMAKYTGKDSDYLSNEKVFKVF
YESLKGKRAFAYGGLFKEVRKKLKNGDLDYLKEVDPTKYIYQIFCGWNQMHYYASELRLM
SEEMQKEVNHQMINELDDKYL
>repA_1_pKPC-2_CP013325 (frame 1)
MCYHLHIASGTIPACFTTLANEAGLATVSKAGNLSITRATRAAHTLAAWGLIQYKLIWDK
VTKQYFPAEIEVTELFFDFIGVGADAFKRAQNQQLAWINRGLLKKGEAAISLTEARRRQK
QQYIETTWKRRKASQEMKKIQKAAKVAVAKKDEELRHMVAKQIQSEIRQGLHEGIDLASV
KHLLNKRIMYYRTVASSDDPNTA
>repA_2_pKPC-2_JX397875 (frame 1)
MDSSDAQQSPFAIKKKDSGESYELTPNSNKTVQPVALLRLSVFTPVSPKEKGKRDFLIDA
SEELSSLEVARQEGYTNIKIQGAKLGMSTDFKTWIGIISAFSKYGYTSEKITLPFSEFAR
MCGLRPTDINGRARNRLSEALFNLSSVTLSFRSQDGKRSLVTHLVQRAQLDMDTNMVEIV
GDPSLWELYRYDHKVLLGLKVLSALSRKESAPSPSTSISKACQPGHCTFQ
>Rep_1_pKPC-2_CP011573 (frame 1)
MIIQDNHTIEIFKNQLPVKPYCSNNLQSGLSIRNKNRALEMLYLQANQPAIQTCLLFDLD
EDNAFYKFDEVGLPVPTFITKSPDSGRCHYGYMLKAGVCKTQHAKLKPLKYAAAVEAGIA
GKLASDRGYAGLITKNPLHSHWSPFWSGADLYELDYLADFVELETPKKAKKSENYGLGRN
VNLFEDLRTYAYRRVLKFKKDSTYEAWERDVLSIAEGLNNHCNALNPLQYNEIKATARSV
SRWTWKHFDSAIFSDIQSNRGKKNLGKTKNTNVKSEMLEILMSKGAL
>rep4_2_CDS3(pKC5b)_AF378372
MVQKQNFIWKNDRNFALDKYEQQQYYYVVESNDLISKAKHDLTTNQLKIIDFLISKIKPD
DKDFEELETSMYELTNVLEIKRSGRTYNQIADTLDDLRKKEVTIYNQDRESIVRTGWVSS
AEYFKNGKVILSFDKKLAPYLLDLSKNYSQYLLIDTVKLKSKYAILLYKLMREADRDNGK
SITILQGTPEEFKEWLGAPKSYSYNSLKNQVLIKAIEEINLKIDDMNLEILQGRYGRKVV
QVEIHNNWTVQRATKENTEYVESISTMIG
>rep5_5_rep(pRJ6)_AF241888.2
MIYYYKIDRNFINIKVLFILEWIYLSGETVVYKNDMNLVPLRKFNNTEVNLFFTLCNKLK
DKGNLTVNIPFEELKELSNYYTHDKKLFIQDLEKFYDKIFSLTYREETENVIRKFILFTK
VEIYKENEYVSIGVNPDLEHIINSLTSNFTKFELREMTHLKSTYSKHMFRILKQYKHTGY
VKIKIEDFRERLDIPKSYRMTNINQKVLAPIIKELGFIFNNLNINKIKAKKGRKIEYLEF
TFDAENRIHNKRQPQMPNIGKSRQYISREKTPKWLAERTYEKAPQKEYDPQLEKEREAFL
KQLEMNWEE
>rep10_4_repL(pDLK1)_GU562624.1
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKTGVLMLNPELL
MRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD
>rep10_5_repL(pWBG738)_DQ088624.1
MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQLISMLDMIGGKKLKI
VNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGNIIKRKTGVLMLNPELL
MRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD
>rep13_4_rep(pKH13)_NC010426.1
MDLVEDCNTFLSFVADKTLEKQKLYKANSCKNRFCPVCAWRKARKDALGLSLMMQYIKQQ
EKKEFIFLTLTTPNVMSDELENEIKRYNNSFRKLIKRKKVGSVIKGYVRKLEITYNKKRD
DYNPHFHVLIAVNKSYFTDKRYYISQQEWLDLWRDVTGISEITQVQVQKIRQNNNKELYE
MAKYSGKDSDYLINQKVFDAFYKSLKGKQVLVYSGLFKEAKKKLKNGDLDYLKEIDPTEY
IYQIFYIWKQKEYLASELYDLTEQEKREINHKMIDEIEEEQ
>rep13_5_rep(pMC524/MBM)_AJ312056.2
MCYNMEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKTLEKQKLYKANSC
KNRFCPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVMSDELENEIKRYNNS
FRKLIKRKKVGSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYSQIKDIILATRMVR
FMASCNGHSEITQFKFKNRQILLKNYMKWLSILVKIVLFNKIKSL
>rep16_3_rep(Saa6159)_CP002115.1
MKSVKRLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESATEDKQKKESDNINFESKSDAQIVEILKNQINTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNARQNVDAQEKTYTTSPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAQREDVSANPNDNDSDIEEKSEETEPKKGF
WSRLFGN
>rep16_7_rep(pBORa53)_AY917098.1
MKSVKKLSEELGVSKQTIFNNIKRLNIETIKQENTSFIKEDTDIEKIIQRVNENKKKYGF
ESTTEDKQKKGSDNINFESKSDAQIVEILKNQIDTLNNQIEKQESRHETTIEFYRKELQE
RSKLLENQQVLALESNKKIQKLENQLEKEKHLNYPFDTSTNTRQNVDAQKKTYTTNPVNI
NRDQEETKETEIQYKDISGSQSDESTQGEEAKREDVPANLNDNDSDIEEKSEETEPKKGF
WSRLFGS
>rep19_6_ORF34(EDINA)_AP003089.1
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIKAVI
LKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQTIL
TELEETHALYMRRKNMKQYNIFNQ
>rep19_8_repA(pWBG759)_GQ900401.1
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKEVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSSQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIKAVI
LKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQTIL
TELEETHALYMRRKNMKQYNIFNQ
>rep19_9_repA(AP071A)_GQ900485.1
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKEVRKSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNQFTHNFDDKEILLQEFPEQLTNYLLKYDYRDLEIIKAVI
LKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETINSMQAYLMQTIL
TELEETHALYMRRKNMKQYNIFNQ
>rep20_1_ORF1(EDINA)_AP003089
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVGRN
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLIKELPNSQSNDTELNNTNYIENEDNDTYDMNDIISNALINNNHHSNHTNHQKTEFNND
ALKFQVLEELPQQLQDYLSKFEIREIRIIKSILLKGKKSFNTSHDTYYRLEDVEFEIVSV
LKRFKAMLLQKNETVEAMQGYLMQFIKAELEETHALYMRRKNMKQYNIFNQ
>rep20_2_repA(pWBG753)_GQ900395.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDKN
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELISFNLLTQERVGLNKPNRLYLLKPNYDIKV
SHSKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTENNDTDYIKTESNDTNDLNDNKL
TFPSNHTNHSNHDNSNFNNEALKFQLLEELPQSIKNYLSNFEVAEIKIIKTVLLKAKTSF
NNAIDSYYLLEDMEIEILHVLKRFKAMLIQKNETVESMQGYLMKSLKSEFAEMHTLNKRR
DHLPITSLFNQ
>rep20_3_rep(pTW20)_FN433597.1
LFYYLYPKSGNEVFIMPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLK
DRFELSIQNEWVDRNNNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNK
PNRLYLLKPNYDIEASLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELNNTNYI
ENEDNDTYDMNDIISNTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQDYLSKFE
IREIRIIKSVLLKGKKSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYL
MQSIKAELEETHALYMRRKNMKQYNIFNQ
>rep20_4_repA(SAP102A)_GQ900496.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPKYDIEA
SLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQNYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNIFNQ
>rep20_5_repA(pSK23)_GQ900491.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQDYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNIFNQ
>rep20_6_repA(SAP059A)_GQ900480.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQKLQDYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNTFNQ
>rep20_7_repA(SAP074A)_GQ900426.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLTKELPNSQFQNNESGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQDYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNIFNQ
>rep20_8_repA(SAP063A)_GQ900418.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLTKELPDSQFQNNESGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQDYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNIFNQ
>rep20_9_repA(SAP055A)_GQ900414.1
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSIQNEWVDRN
NNIYFIFSNKHLCEYLGYGEQKIIKLKKELVNFNLLTQERVGLNKPNRLYLLKPNYDIEA
SLTKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTELNNTNYIENEDNDTYDMNDIIS
NTLINNNHHSNHTNHQKTEFNNDALKFQVLEELPQQLQDYLSKFEIREIRIIKSVLLKGK
KSFNTSHDTYYRLEDVEFEIVSVLKRFKAMLLQKNETVEAMQGYLMQSIKAELEETHALY
MRRKNMKQYNIFNQ
>rep21_7_rep(pWBG760)_GQ900473.1
MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGN
ILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVIEEVIKEKPKARWLFLT
LSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRSTEVTVNKNDGSYNQHMHV
LLCVENAYFRKKENYITQEEWVNLWQKALQVDYRPVANIKAIKPNKKGDKDIESAIKETS
KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDAEDGNLINT
SDEDKITDEEAKAHSITAIWNFEKQNYYLRH
>rep22_1_repB(pUB110)_X03408.1
MKHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKIN
KNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDY
DPNVKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRL
ISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE
>rep22_2_repU(pKKS825)_FN377602.2
MKKRSGGKFLDKYKRRERLWNEVEKVERSKNSRLAREITVALPIELDEKKQKELLKEYVQ
ETFVDNGMVADVAIHRDNSQNPHAHIMLTVRSFKENGEWDSKARTEYILDENGNKTRTKN
GNFRQRKISTTNWNDKETMQYWRKNWARKVNQSLELNGNSERITEKSYAEQGIKKKPTVR
WLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLVGFMRATEVTINNKDNSYN
QHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSA
IDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEG
DLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE
>repUS22__rep(SAP015B)_GQ900502.1
VNYMKKYTEKKQRNQVFQNFIKRHIGENQMDLVENCNTFLSFVTNRRMDKKKLYKSNPCK
NRFCPMCAWRKARKDALGLSLMMQHIKQAEDKQFIFLTLTTPNVTSEHLESEIKHYNQSF
RRLSNRKHFKSIAKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYFKDTKAYITQKEWLE
MWRDVTGNSEITQVHIQKVKQNNKVLLQSKKI
>repUS23__repA(SAP099B)_GQ900449.1
MSKFKKISASEFETSRFYQLPKFLFEDGHFSKMTTDAKVMYALLKDRFELSKINNWIDEE
NNIYLLYTNKQLCSILQYGEPKIIKLKKELEKFNLIINERQGLNRPNKIYLLEPSYDKEL
TNRKFQNKQIISSRTNENIVQELTICKSNDTDINDTDNKETENNDTYDMNDSEHIANPNT
SHSNHPNHQSNEFDNNALKYHLLQEIPDQLQTYLNNFEVDEIQIIKSVILKAKSSFNNEK
NTVYMLEDIEFEMINVLKRFKATLIQKSESVEAMQGYLMRSIKTELEEMHSLNMRRQNAP
QNHIFDTSHYL