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                                  ---  PhyML 20120412  ---                                             
                            http://www.atgc-montpellier.fr/phyml                                          
                         Copyright CNRS - Universite Montpellier II                                 
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. Sequence filename: 			C:\Users\Claire\Desktop\prot_aa.concat.phy
. Data set: 				#1
. Tree topology search : 		NNIs
. Initial tree: 			BioNJ
. Model of amino acids substitution: 	MtMam
. Number of taxa: 			66
. Log-likelihood: 			-76173.69056
. Unconstrained likelihood: 		-22887.65681
. Parsimony: 				12272
. Tree size: 				4.38823
. Discrete gamma model: 		Yes
  - Number of categories: 		4
  - Gamma shape parameter: 		0.769
. Proportion of invariant: 		0.249. aLRT statistics to test branches

. Run ID:				none
. Random seed:				1418104563
. Subtree patterns aliasing:		no
. Version:				20120412
. Time used:				0h17m59s (1079 seconds)

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 Suggested citations:
 S. Guindon, JF. Dufayard, V. Lefort, M. Anisimova, W. Hordijk, O. Gascuel
 "New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0."
 Systematic Biology. 2010. 59(3):307-321.

 S. Guindon & O. Gascuel
 "A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood"
 Systematic Biology. 2003. 52(5):696-704.
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