Discrepancy Report Results Summary DISC_SOURCE_QUALS_ASNDISC:strain (all present, all same) DISC_SOURCE_QUALS_ASNDISC:taxname (all present, all same) DISC_FEATURE_COUNT:gene: 793 present DISC_FEATURE_COUNT:CDS: 755 present DISC_FEATURE_COUNT:tRNA: 34 present DISC_FEATURE_COUNT:rRNA: 3 present DISC_FEATURE_COUNT:tmRNA: 1 present DISC_COUNT_NUCLEOTIDES:2 nucleotide Bioseqs are present OVERLAPPING_GENES:156 genes overlap another gene on the same strand. OVERLAPPING_CDS:8 coding regions overlap another coding region with a similar or identical name. SUSPECT_PRODUCT_NAMES:2 product_names contain suspect phrase or characters May contain database identifier more appropriate in note; remove from product name 2 features Contains underscore DISC_SUSPICIOUS_NOTE_TEXT:6 note texts contain suspicious phrases NO_ANNOTATION:1 bioseqs have no features DISC_QUALITY_SCORES:Quality scores are missing on all sequences. FATAL: DISC_SUSPECT_RRNA_PRODUCTS:1 rRNA product names contain suspect phrase FATAL: DISC_SHORT_RRNA:1 rRNA features are too short ONCALLER_COMMENT_PRESENT:2 comment descriptors were found (all same) SHORT_PROT_SEQUENCES:49 protein sequences are shorter than 50 aa. MISSING_GENOMEASSEMBLY_COMMENTS:2 bioseqs are missing GenomeAssembly structured comments MOLTYPE_NOT_MRNA:2 molecule types are not set as mRNA. TECHNIQUE_NOT_TSA:2 technique are not set as TSA MISSING_STRUCTURED_COMMENT:2 sequences do not include structured comments. MISSING_PROJECT:757 sequences do not include project. FATAL: RRNA_NAME_CONFLICTS:1 rRNA product names are not standard. Correct the names to the standard format, eg "16S ribosomal RNA" DISC_INCONSISTENT_MOLINFO_TECH:Molinfo Technique Report (some missing, all same) DISC_GAPS:1 sequences contain gaps Detailed Report DiscRep_ALL:DISC_SOURCE_QUALS_ASNDISC::strain (all present, all same) DiscRep_SUB:DISC_SOURCE_QUALS_ASNDISC::2 sources have 'wDim' for strain DiscRep_ALL:DISC_SOURCE_QUALS_ASNDISC::taxname (all present, all same) DiscRep_SUB:DISC_SOURCE_QUALS_ASNDISC::2 sources have 'Genus wolbachia endosymbiont' for taxname DiscRep_ALL:DISC_FEATURE_COUNT::gene: 793 present DiscRep_ALL:DISC_FEATURE_COUNT::CDS: 755 present DiscRep_ALL:DISC_FEATURE_COUNT::tRNA: 34 present DiscRep_ALL:DISC_FEATURE_COUNT::rRNA: 3 present DiscRep_ALL:DISC_FEATURE_COUNT::tmRNA: 1 present DiscRep_ALL:DISC_COUNT_NUCLEOTIDES::2 nucleotide Bioseqs are present /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:OVERLAPPING_GENES::156 genes overlap another gene on the same strand. /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene trmD wDim_contig000001:6148-6855 wDim_00007 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene rplS wDim_contig000001:6839-7216 wDim_00008 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene pstA wDim_contig000001:7327-8583 wDim_00009 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene purL_1 wDim_contig000001:8580-9377 wDim_00010 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene obg wDim_contig000001:c13869-12847 wDim_00014 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene eno wDim_contig000001:c15131-13857 wDim_00015 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene gatC wDim_contig000001:c36468-36115 wDim_00034 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene prs wDim_contig000001:c37384-36458 wDim_00035 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00036 wDim_contig000001:c39037-38210 wDim_00036 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene era wDim_contig000001:c39911-39027 wDim_00037 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene hyfB wDim_contig000001:64408-65955 wDim_00059 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene ffh wDim_contig000001:65940-67283 wDim_00060 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene ispH_1 wDim_contig000001:70930-71460 wDim_00065 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene ispH_2 wDim_contig000001:71417-71755 wDim_00066 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene hscA wDim_contig000001:c113812-112025 wDim_00101 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00102 wDim_contig000001:c114284-113790 wDim_00102 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene iscA wDim_contig000001:c114645-114241 wDim_00103 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00110 wDim_contig000001:121559-121795 wDim_00110 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00111 wDim_contig000001:121734-121967 wDim_00111 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00115 wDim_contig000001:c128452-125606 wDim_00115 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene virB4_1 wDim_contig000001:c130793-128433 wDim_00116 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00120 wDim_contig000001:c135139-133865 wDim_00120 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene sodB wDim_contig000001:c135740-135108 wDim_00121 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00124 wDim_contig000001:139006-139167 wDim_00124 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene tsaB wDim_contig000001:139167-139766 wDim_00125 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00157 wDim_contig000001:177109-177330 wDim_00157 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene mutM wDim_contig000001:177276-178163 wDim_00158 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene lgt wDim_contig000001:c185391-184603 wDim_00163 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/home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00690 wDim_contig000001:785668-788616 wDim_00690 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00691 wDim_contig000001:788770-792027 wDim_00691 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00692 wDim_contig000001:792017-792655 wDim_00692 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00694 wDim_contig000001:c794097-793801 wDim_00694 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00695 wDim_contig000001:c794261-794067 wDim_00695 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00698 wDim_contig000001:797135-798184 wDim_00698 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene ccmH wDim_contig000001:798168-798545 wDim_00699 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00708 wDim_contig000001:c809207-808713 wDim_00708 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene gph wDim_contig000001:c809842-809207 wDim_00709 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene pgpA wDim_contig000001:825923-826405 wDim_00720 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00721 wDim_contig000001:826395-827174 wDim_00721 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene argB wDim_contig000001:c835194-834256 wDim_00729 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene engB wDim_contig000001:c835750-835169 wDim_00730 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00738 wDim_contig000001:c855184-855071 wDim_00738 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene pyrC wDim_contig000001:c856512-855181 wDim_00739 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene fabF wDim_contig000001:c873452-872187 wDim_00755 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene acpP wDim_contig000001:c873721-873449 wDim_00756 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene psd wDim_contig000001:888086-888778 wDim_00768 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00769 wDim_contig000001:888775-889545 wDim_00769 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene ribF wDim_contig000001:901832-902767 wDim_00779 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene lspA wDim_contig000001:902764-903243 wDim_00780 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00781 wDim_contig000001:903283-904623 wDim_00781 /home/yquentin/work/wolbachia/prokka/wDim/wDim:Gene wDim_00782 wDim_contig000001:904610-905920 wDim_00782 DiscRep_ALL:OVERLAPPING_CDS::8 coding regions overlap another coding region with a similar or identical name. DiscRep_SUB:OVERLAPPING_CDS::8 coding regions overlap another coding region with a similar or identical name that do not have the appropriate note text /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS 4-hydroxy-3-methylbut-2-enyl diphosphate reductase wDim_contig000001:70930-71460 wDim_00065 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS 4-hydroxy-3-methylbut-2-enyl diphosphate reductase wDim_contig000001:71417-71755 wDim_00066 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS 60 kDa chaperonin 5 wDim_contig000001:517496-518134 wDim_00442 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS 60 kDa chaperonin 5 wDim_contig000001:518131-519147 wDim_00443 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS Dephospho-CoA kinase wDim_contig000001:691807-691986 wDim_00613 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS Dephospho-CoA kinase wDim_contig000001:691946-692395 wDim_00614 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS TrbL/VirB6 plasmid conjugal transfer protein wDim_contig000001:783266-785671 wDim_00689 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS TrbL/VirB6 plasmid conjugal transfer protein wDim_contig000001:785668-788616 wDim_00690 DiscRep_ALL:SUSPECT_PRODUCT_NAMES::2 product_names contain suspect phrase or characters DiscRep_SUB:SUSPECT_PRODUCT_NAMES::May contain database identifier more appropriate in note; remove from product name DiscRep_SUB:SUSPECT_PRODUCT_NAMES::2 features Contains underscore /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS Aspartate kinase Ask_LysC wDim_contig000001:c314648-313485 wDim_00272 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS Putative O-methyltransferase/MSMEI_4947 wDim_contig000001:319514-320161 wDim_00278 DiscRep_ALL:DISC_SUSPICIOUS_NOTE_TEXT::6 note texts contain suspicious phrases DiscRep_SUB:DISC_SUSPICIOUS_NOTE_TEXT::6 note texts contain 'homolog' /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c114284-113790 wDim_00102 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c133631-133158 wDim_00119 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c320816-320289 wDim_00279 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c355911-355435 wDim_00306 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c397830-397213 wDim_00342 /home/yquentin/work/wolbachia/prokka/wDim/wDim:CDS hypothetical protein wDim_contig000001:c480761-478929 wDim_00415 DiscRep_ALL:NO_ANNOTATION::1 bioseqs have no features /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:DISC_QUALITY_SCORES::Quality scores are missing on all sequences. FATAL: DiscRep_ALL:DISC_SUSPECT_RRNA_PRODUCTS::1 rRNA product names contain suspect phrase FATAL: DiscRep_SUB:DISC_SUSPECT_RRNA_PRODUCTS::1 rRNA product names contains 'partial' /home/yquentin/work/wolbachia/prokka/wDim/wDim:rRNA 23S ribosomal RNA (partial) wDim_contig000001:c744906-743065 wDim_00661 FATAL: DiscRep_ALL:DISC_SHORT_RRNA::1 rRNA features are too short /home/yquentin/work/wolbachia/prokka/wDim/wDim:rRNA 23S ribosomal RNA (partial) wDim_contig000001:c744906-743065 wDim_00661 DiscRep_ALL:ONCALLER_COMMENT_PRESENT::2 comment descriptors were found (all same) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001:Annotated using prokka 1.10 from http://www.vicbioinformatics.com /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002:Annotated using prokka 1.10 from http://www.vicbioinformatics.com DiscRep_ALL:SHORT_PROT_SEQUENCES::49 protein sequences are shorter than 50 aa. /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00018 (length 43) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00028 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00031 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00052 (length 44) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00086 (length 38) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00087 (length 36) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00122 (length 44) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00144 (length 48) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00154 (length 37) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00207 (length 36) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00215 (length 46) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00216 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00217 (length 48) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00228 (length 42) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00238 (length 45) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00275 (length 31) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00303 (length 44) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00311 (length 32) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00312 (length 37) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00325 (length 47) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00372 (length 37) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00395 (length 43) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00396 (length 38) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00419 (length 45) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00430 (length 42) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00452 (length 43) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00461 (length 42) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00469 (length 35) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00477 (length 48) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00485 (length 48) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00486 (length 39) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00515 (length 47) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00517 (length 39) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00520 (length 38) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00523 (length 36) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00538 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00584 (length 32) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00586 (length 39) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00606 (length 30) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00611 (length 38) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00674 (length 36) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00707 (length 35) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00732 (length 43) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00738 (length 37) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00743 (length 45) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00746 (length 48) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00758 (length 39) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00765 (length 49) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00791 (length 44) DiscRep_ALL:MISSING_GENOMEASSEMBLY_COMMENTS::2 bioseqs are missing GenomeAssembly structured comments /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:MOLTYPE_NOT_MRNA::2 molecule types are not set as mRNA. /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:TECHNIQUE_NOT_TSA::2 technique are not set as TSA /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:MISSING_STRUCTURED_COMMENT::2 sequences do not include structured comments. /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:MISSING_PROJECT::757 sequences do not include project. /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00001 (length 348) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00002 (length 280) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00003 (length 119) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00004 (length 97) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00005 (length 345) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00006 (length 240) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00007 (length 235) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00008 (length 125) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00009 (length 418) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00010 (length 265) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00011 (length 205) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00012 (length 69) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00014 (length 340) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00015 (length 424) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00016 (length 485) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00017 (length 223) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00018 (length 43) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00019 (length 241) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00020 (length 50) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00021 (length 506) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00022 (length 326) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00023 (length 70) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00024 (length 264) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00025 (length 343) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00026 (length 299) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00027 (length 60) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00028 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00030 (length 298) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00031 (length 34) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00032 (length 269) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00033 (length 408) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00034 (length 117) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00035 (length 308) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00036 (length 275) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00037 (length 294) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00038 (length 606) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00039 (length 138) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00040 (length 194) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00041 (length 276) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00042 (length 222) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00043 (length 198) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00044 (length 326) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00045 (length 706) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00046 (length 369) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00047 (length 245) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00050 (length 550) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00051 (length 57) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00052 (length 44) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00053 (length 90) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00054 (length 374) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00055 (length 780) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00056 (length 186) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00057 (length 146) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00058 (length 965) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00059 (length 515) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00060 (length 447) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00061 (length 58) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00062 (length 237) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00063 (length 121) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00064 (length 67) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00065 (length 176) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00066 (length 112) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00067 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/home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00789 (length 427) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00790 (length 324) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00791 (length 44) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00792 (length 425) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_00793 (length 403) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) FATAL: DiscRep_ALL:RRNA_NAME_CONFLICTS::1 rRNA product names are not standard. Correct the names to the standard format, eg "16S ribosomal RNA" /home/yquentin/work/wolbachia/prokka/wDim/wDim:rRNA 23S ribosomal RNA (partial) wDim_contig000001:c744906-743065 wDim_00661 DiscRep_ALL:DISC_INCONSISTENT_MOLINFO_TECH::Molinfo Technique Report (some missing, all same) DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::technique (all missing) DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::2 Molinfos are missing field technique /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap) /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000002 (length 1058) DiscRep_ALL:DISC_GAPS::1 sequences contain gaps /home/yquentin/work/wolbachia/prokka/wDim/wDim:Prokka:wDim_contig000001 (length 919954, 1 other, 3444 gap)