##FastQC 0.9.1 >>Basic Statistics pass #Measure Value Filename ERR022486_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 31504560 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.67761174890238 38.0 38.0 38.0 34.0 38.0 2 36.39109801882648 38.0 36.0 38.0 32.0 38.0 3 36.35964565129619 38.0 36.0 38.0 32.0 38.0 4 36.31797698491901 38.0 36.0 38.0 32.0 38.0 5 36.25610556059186 38.0 36.0 38.0 32.0 38.0 6 36.28890855799922 38.0 36.0 38.0 32.0 38.0 7 36.231457541384486 38.0 36.0 38.0 32.0 38.0 8 36.22566666539701 38.0 36.0 38.0 32.0 38.0 9 36.135199761558326 38.0 36.0 38.0 31.0 38.0 10 35.95697041317193 38.0 35.0 38.0 31.0 38.0 11 35.54537146368653 38.0 34.2 38.0 29.8 38.0 12 35.04133119142118 37.8 33.4 38.0 29.0 38.0 13 34.46463945536773 36.2 32.2 38.0 28.2 38.0 14 33.604153716160454 34.8 30.8 38.0 27.4 38.0 15 32.69976284068084 33.8 30.0 36.6 26.8 38.0 16 31.62262287110184 32.2 29.0 35.4 26.0 38.0 17 30.478732856449987 31.0 28.2 34.2 25.0 36.6 18 29.464747515915157 30.0 27.0 32.6 23.8 35.6 19 28.610365045568006 29.0 26.6 31.8 23.4 34.4 20 27.771121088502746 28.6 26.0 30.6 22.4 33.4 21 27.00866361567976 28.0 25.4 30.0 21.2 32.0 22 26.111476859222922 27.2 24.4 29.4 19.6 31.6 23 25.51384847145937 27.0 24.0 29.0 18.0 31.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 2.0 4 4.0 5 52.0 6 244.0 7 721.0 8 1860.0 9 4150.0 10 7329.0 11 12668.0 12 16272.0 13 15038.0 14 14265.0 15 17153.0 16 23277.0 17 32691.0 18 48987.0 19 73323.0 20 108740.0 21 157860.0 22 227549.0 23 317764.0 24 438265.0 25 596423.0 26 793527.0 27 1007473.0 28 1297306.0 29 1726278.0 30 2371470.0 31 3377175.0 32 4693444.0 33 5507396.0 34 4752761.0 35 2779200.0 36 966426.0 37 117342.0 38 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 8732417 3767400 7217570 11609090 2 7173220 6898682 11149645 6283013 3 7791677 7814755 8799141 7098987 4 7687923 10494554 6812306 6509777 5 7837902 10691365 7179737 5795556 6 6116377 11831282 7233384 6323517 7 5139609 5204658 14102574 7057719 8 6552238 7452843 8894980 8604499 9 6556248 6965409 9770064 8212839 10-14 6590990 12234949 7342605 5336016 15-19 8011582 8448899 6772435 8271620 20-24 6547005 7797365 9367536 7792654 25-29 6415547 8436303 9952571 6700139 30-34 6717274 8558461 9468973 6759852 35-39 6821407 8640806 9032720 7009607 40-44 6996704 8832617 8786441 6888658 45-49 7048386 8679873 8682512 7093789 50-54 6916490 8919059 8727696 6941315 55-59 6945577 8641410 8788789 7128767 60-64 7019652 8861928 8661381 6960947 65-69 6890468 8796658 8799146 7018288 70-74 6950223 8984659 8686093 6881024 75-76 7005972 8950702 8643069 6904809 >>END_MODULE >>Per base GC content fail #Base %GC 1 64.93391197484479 2 42.712016927073414 3 47.2651070194283 4 45.065539718694694 5 43.27455454067602 6 39.486010913975626 7 38.71607157820963 8 48.10966095066873 9 46.87920415330352 10-14 43.893766194166105 15-19 44.30519164221891 20-24 44.013216420907995 25-29 44.293994406674244 30-34 43.82481623261746 35-39 44.22131571230486 40-44 44.262616840174694 45-49 44.325588610254265 50-54 44.34249767294696 55-59 44.493625752026304 60-64 44.51104167637652 65-69 44.65260571497238 70-74 44.751558619382934 75-76 44.85798389691786 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 73902.0 1 44067.0 2 11894.0 3 9474.0 4 9392.0 5 9334.5 6 9326.5 7 9573.0 8 9770.0 9 10321.0 10 11700.0 11 13780.5 12 15033.0 13 16984.0 14 21560.5 15 27748.0 16 36710.5 17 42111.0 18 50008.0 19 70222.0 20 98189.0 21 113839.0 22 135172.5 23 184286.0 24 248361.5 25 284657.0 26 325371.0 27 414443.5 28 507595.0 29 552388.0 30 608813.0 31 708063.0 32 806411.0 33 861934.0 34 909614.5 35 998180.5 36 1081828.5 37 1124591.0 38 1162723.5 39 1224405.5 40 1280397.5 41 1355204.5 42 1397569.0 43 1414124.5 44 1452106.5 45 1479815.5 46 1486098.0 47 1510598.0 48 1529978.5 49 1526871.5 50 1528884.0 51 1501729.5 52 1443051.5 53 1349574.0 54 1287620.0 55 1206783.0 56 1042713.5 57 876864.5 58 794248.0 59 706462.5 60 544882.0 61 412344.5 62 353602.0 63 305899.5 64 222803.5 65 159315.5 66 111904.5 67 92588.0 68 77667.5 69 53147.0 70 37124.5 71 30702.0 72 26324.5 73 18481.0 74 13075.0 75 11135.0 76 9808.0 77 7798.5 78 6216.5 79 5317.0 80 4609.0 81 3387.0 82 2507.0 83 2141.0 84 1941.0 85 1532.0 86 1186.5 87 1050.0 88 884.0 89 581.0 90 380.0 91 268.0 92 220.0 93 215.0 94 168.0 95 113.5 96 101.0 97 124.0 98 194.0 99 205.5 100 170.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5652610288796289 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 1.523588966168707E-5 15-19 1.1236468625494214E-4 20-24 0.002095569657217876 25-29 0.059964652735984884 30-34 0.1467400274753877 35-39 0.2256384472596983 40-44 0.2632653812654422 45-49 0.339718440759052 50-54 0.5009795407394992 55-59 0.38665767749176627 60-64 0.33664269553359893 65-69 0.3750841148075072 70-74 0.3434937672514709 75-76 0.32139791826960923 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 3.150456E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 67.04898823741495 #Duplication Level Relative count 1 100.0 2 45.226013813854884 3 23.24557204404021 4 13.864460097107298 5 9.374273404910074 6 6.987622238938658 7 5.277986733228476 8 4.427272105587089 9 3.698283525952267 10++ 61.44019695001026 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 64433 0.20451959970239228 No Hit >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 17091075 4.8419404 7.863731 2 CACAC 8645620 4.4589205 7.899114 7 GTGTG 7970515 4.3080115 5.1752267 6 ACACA 9699215 4.002724 7.926882 6 TGTGT 8864810 3.863193 5.047053 7 AAAAA 13551545 3.580792 6.9255157 2 CTGGA 4154955 2.2006643 5.9734254 1 CTCCA 4052920 2.1195982 5.825102 6 TCCAG 3880265 2.0421982 6.553185 7 TCTGC 3505250 1.8707143 5.232288 7 GTTTG 3822225 1.6656864 5.654764 1 GTTTT 4649465 1.6336782 6.4691815 1 CTCAG 3078985 1.6204815 5.1298175 1 ATCCA 2832505 1.1853368 5.6020374 6 >>END_MODULE