##FastQC 0.9.1 >>Basic Statistics pass #Measure Value Filename ERR022488_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24920613 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.988893772396366 38.0 38.0 38.0 35.0 38.0 2 36.80530611345716 38.0 38.0 38.0 34.0 38.0 3 36.76991352500037 38.0 38.0 38.0 34.0 38.0 4 36.7518328702428 38.0 38.0 38.0 34.0 38.0 5 36.72252833427493 38.0 38.0 38.0 34.0 38.0 6 36.74793023751061 38.0 38.0 38.0 34.0 38.0 7 36.67116739865107 38.0 37.0 38.0 33.0 38.0 8 36.67205236885626 38.0 38.0 38.0 33.0 38.0 9 36.6330276065039 38.0 37.0 38.0 33.0 38.0 10 36.5192957412404 38.0 36.4 38.0 32.4 38.0 11 36.19395199468006 38.0 35.6 38.0 31.6 38.0 12 35.81309425253705 38.0 34.8 38.0 30.6 38.0 13 35.37607551628044 37.8 33.8 38.0 29.8 38.0 14 34.696565281118886 36.4 32.6 38.0 29.0 38.0 15 33.95237825008557 35.2 31.8 38.0 28.4 38.0 16 32.950793240920675 33.8 30.4 36.8 27.2 38.0 17 32.01797165262347 32.4 29.4 35.6 26.4 38.0 18 31.189512473067982 31.8 28.8 34.8 26.0 37.6 19 30.226745754608846 30.6 28.0 33.8 25.0 36.2 20 29.360000510420832 30.0 27.2 32.2 24.0 35.2 21 28.590042468056463 29.0 26.6 31.8 23.4 34.4 22 27.75354940907754 28.6 26.0 30.6 22.4 33.6 23 27.078225042056552 28.0 25.5 30.0 20.5 33.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 6.0 4 11.0 5 106.0 6 367.0 7 508.0 8 794.0 9 1581.0 10 3173.0 11 8572.0 12 13450.0 13 12687.0 14 10891.0 15 12135.0 16 12631.0 17 15726.0 18 22195.0 19 31898.0 20 46853.0 21 68775.0 22 100557.0 23 143458.0 24 204636.0 25 287529.0 26 394794.0 27 502040.0 28 645735.0 29 875596.0 30 1239734.0 31 1864214.0 32 2884274.0 33 4095335.0 34 4701704.0 35 4030171.0 36 2260016.0 37 427882.0 38 577.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 6815098 3016878 5765975 9192468 2 5667974 5330644 8914070 5007855 3 6172321 6140967 7036793 5570532 4 6043755 8211824 5440335 5224699 5 6197126 8438455 5712724 4572308 6 4836823 9298399 5753111 5032280 7 4090858 4101391 11174523 5553841 8 5200383 5894396 7040633 6785178 9 5177261 5537067 7750249 6456007 10-14 5220258 9619726 5833015 4247614 15-19 6350288 6672454 5366963 6530894 20-24 5165004 6105613 7462157 6187839 25-29 5064493 6643477 7937664 5274979 30-34 5300598 6715060 7545208 5359747 35-39 5395689 6827415 7195612 5501897 40-44 5523597 6950756 6969774 5476485 45-49 5569859 6872105 6894698 5583878 50-54 5452305 7022740 6928591 5516952 55-59 5477881 6827306 6985649 5629394 60-64 5523917 6972949 6907180 5515832 65-69 5435278 6963852 6993188 5528284 70-74 5482680 7074999 6913988 5448128 75-76 5547994 7072464 6871205 5428944 >>END_MODULE >>Per base GC content fail #Base %GC 1 64.57158307812385 2 42.83947183654867 3 47.12104393258706 4 45.21740295874744 5 43.21496425469149 6 39.602167892098 7 38.701692450342215 8 48.09501299929095 9 46.68136188140695 10-14 43.900782172661245 15-19 44.24301300399206 20-24 43.92333987539387 25-29 44.14437930406569 30-34 43.67362763580207 35-39 44.04318339391195 40-44 44.0856327990182 45-49 44.11822477947854 50-54 44.17102465448684 55-59 44.32554573643137 60-64 44.26502144984845 65-69 44.38332481349748 70-74 44.49001431046209 75-76 44.46833844747266 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 42383.0 1 24508.0 2 5795.5 3 4996.5 4 5035.0 5 5094.0 6 5467.5 7 6131.0 8 6480.0 9 7133.5 10 8732.5 11 11107.0 12 12536.0 13 14025.5 14 17888.0 15 24009.5 16 32713.0 17 37668.0 18 44342.0 19 60918.0 20 84256.0 21 97692.0 22 115840.0 23 155783.5 24 206397.5 25 235216.0 26 267833.5 27 339191.0 28 414505.5 29 451080.0 30 493685.0 31 572064.5 32 650555.5 33 693272.0 34 726781.0 35 795885.5 36 866635.5 37 901790.0 38 931488.5 39 976705.0 40 1017641.5 41 1076022.5 42 1108985.0 43 1121949.0 44 1147161.5 45 1167740.5 46 1176071.0 47 1201917.0 48 1225468.5 49 1220382.5 50 1217591.0 51 1199409.0 52 1148250.5 53 1053231.0 54 991188.0 55 918341.0 56 782229.0 57 663467.5 58 607971.0 59 541880.0 60 421204.0 61 320820.0 62 275021.0 63 237030.5 64 172049.5 65 121934.5 66 82398.0 67 65986.0 68 55092.0 69 37354.0 70 25787.0 71 21064.0 72 17905.0 73 12548.5 74 9044.5 75 7738.0 76 6741.5 77 5380.0 78 4360.5 79 3706.0 80 3234.0 81 2423.0 82 1793.5 83 1503.0 84 1311.5 85 964.5 86 680.5 87 552.0 88 466.5 89 309.5 90 207.0 91 184.5 92 193.0 93 175.0 94 153.0 95 176.5 96 204.0 97 269.5 98 432.5 99 848.0 100 1166.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.522434981836121 2 2.808919668228065E-4 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 9.229307481320784E-5 9 1.1636952911230553E-4 10-14 1.123567867291226E-5 15-19 3.868283657388364E-4 20-24 0.0013242049864503735 25-29 0.07326144023824775 30-34 0.17298771904206367 35-39 0.24418821479230868 40-44 0.2966532163554725 45-49 0.3602014123809876 50-54 0.35532352273999035 55-59 0.4061842298983576 60-64 0.3843228093947769 65-69 0.42680892319944136 70-74 0.423269684417474 75-76 0.38773123277505256 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 2.4920613E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 57.464820750642204 #Duplication Level Relative count 1 100.0 2 32.38878081108237 3 14.895140774312162 4 8.956324689484148 5 5.778480877354255 6 4.267054321568292 7 3.344592427902602 8 2.7075272035402014 9 2.1923167368578573 10++ 39.25005878957607 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32060 0.12864852080484537 No Hit >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 11296035 3.88962 6.6844645 2 CACAC 5443925 3.596398 6.2960324 7 GTGTG 5045165 3.434146 4.2426777 6 AAAAA 10030820 3.3843057 6.729543 2 ACACA 6212390 3.280501 6.5145264 6 TGTGT 5732100 3.1088731 4.288944 7 CTGGA 3316640 2.232146 6.107118 1 CTCCA 3269720 2.1688812 5.780912 6 TCCAG 3152575 2.1063967 6.617541 7 TCTGC 2791650 1.8728598 5.270806 7 GTTTG 2954010 1.6021427 5.267237 1 GTTTT 3677820 1.5893723 6.0336704 1 ATCCA 2292615 1.2155763 5.619658 6 >>END_MODULE