##FastQC 0.9.1 >>Basic Statistics pass #Measure Value Filename ERR022488_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24920613 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.82489652240898 35.0 35.0 35.0 31.0 35.0 2 33.6092407518226 35.0 35.0 35.0 30.0 35.0 3 33.55033854905576 35.0 35.0 35.0 30.0 35.0 4 33.53465217729596 35.0 35.0 35.0 30.0 35.0 5 33.55151055072361 35.0 35.0 35.0 30.0 35.0 6 33.5343794713236 35.0 35.0 35.0 30.0 35.0 7 33.442602114161474 35.0 35.0 35.0 30.0 35.0 8 33.44904778225158 35.0 35.0 35.0 30.0 35.0 9 33.423145169021325 35.0 35.0 35.0 30.0 35.0 10 33.346603961949086 35.0 33.8 35.0 29.4 35.0 11 33.16308326765478 35.0 33.0 35.0 29.0 35.0 12 32.8331114246668 35.0 32.4 35.0 28.2 35.0 13 32.55323049236389 35.0 31.6 35.0 28.0 35.0 14 32.215427975226774 35.0 30.8 35.0 27.0 35.0 15 31.724952584432817 33.4 30.0 35.0 27.0 35.0 16 31.131272886425382 32.4 29.4 35.0 26.0 35.0 17 30.43467925126882 31.2 28.6 35.0 25.6 35.0 18 29.67306918975067 30.4 28.0 33.4 24.6 35.0 19 28.972005351553754 30.0 27.4 32.2 23.8 35.0 20 28.260866392010502 29.0 27.0 31.4 22.6 34.8 21 27.459691830213007 28.6 26.0 30.4 21.4 33.0 22 26.619250834640383 28.0 25.4 30.0 19.8 31.6 23 25.926599819193854 27.5 24.5 30.0 17.0 31.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 4920.0 1 2879.0 2 2916.0 3 3235.0 4 4363.0 5 6109.0 6 6110.0 7 6520.0 8 6852.0 9 8338.0 10 11168.0 11 17770.0 12 31854.0 13 53397.0 14 72709.0 15 85589.0 16 93179.0 17 101217.0 18 110658.0 19 123587.0 20 141177.0 21 164811.0 22 196930.0 23 243068.0 24 304702.0 25 391507.0 26 517331.0 27 707006.0 28 1000646.0 29 1484305.0 30 2364447.0 31 3967535.0 32 5736914.0 33 5237195.0 34 1708115.0 35 1554.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 6860549 2934237 6089020 9004769 2 5367115 5355227 8754837 5349880 3 6296062 6133963 6968760 5405567 4 6142667 7843433 5459376 5381490 5 6174267 8299108 5883213 4488164 6 4928738 9202978 5598585 5097570 7 4181869 4071277 11105094 5430507 8 5298222 5887557 6988633 6654746 9 5234163 5518498 7697120 6382013 10-14 5279762 9494790 5776116 4276191 15-19 6387359 6647512 5317858 6479320 20-24 5254840 6080665 7339727 6166455 25-29 5128691 6631375 7847827 5248443 30-34 5345856 6710300 7470226 5325347 35-39 5429717 6806460 7157173 5460226 40-44 5562096 6911055 6933364 5459864 45-49 5594634 6853491 6866729 5561130 50-54 5490543 6995727 6891564 5499170 55-59 5500288 6809114 6963141 5606621 60-64 5567199 6945781 6868161 5506765 65-69 5475772 6941407 6967422 5506068 70-74 5512926 7029920 6899247 5441570 75-76 5568549 7040148 6858429 5417190 >>END_MODULE >>Per base GC content fail #Base %GC 1 63.74538518175509 2 43.16659093612337 3 47.17570932713743 4 46.41790301722732 5 42.91623035721991 6 40.383277325711894 7 38.7771757886754 8 48.140851171835955 9 46.779447348830296 10-14 44.193588434171986 15-19 44.361362530029346 20-24 44.08025927922033 25-29 44.24007743655206 30-34 43.77983881672364 35-39 44.140912189048045 40-44 44.17946001441814 45-49 44.22636110169974 50-54 44.304796792525664 55-59 44.451509719894425 60-64 44.42610828675522 65-69 44.54425714468041 70-74 44.699570762226244 75-76 44.81652352141708 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43926.0 1 25139.0 2 5579.0 3 4957.5 4 5109.0 5 5272.0 6 5640.5 7 6050.0 8 6254.0 9 6669.0 10 7698.0 11 9243.5 12 10175.0 13 11340.0 14 14649.0 15 20115.5 16 28008.5 17 32579.0 18 39303.5 19 56357.0 20 80714.0 21 94742.0 22 112847.5 23 152834.5 24 203886.0 25 233056.0 26 265934.0 27 337706.5 28 411928.0 29 447255.0 30 490494.0 31 569424.5 32 646736.5 33 688357.0 34 722659.5 35 791107.0 36 860668.5 37 896085.0 38 926527.0 39 972555.5 40 1014161.0 41 1071246.5 42 1102313.0 43 1115010.0 44 1139738.0 45 1159371.5 46 1166974.0 47 1192057.0 48 1214859.0 49 1206958.0 50 1201338.0 51 1186105.0 52 1138922.5 53 1046092.0 54 985211.0 55 919579.0 56 789989.0 57 670759.5 58 615488.0 59 552241.0 60 434836.0 61 336172.5 62 291667.0 63 253188.0 64 187048.5 65 135972.0 66 95361.0 67 78166.0 68 66242.0 69 46346.0 70 33132.0 71 27890.0 72 24095.5 73 17513.0 74 12988.0 75 11251.0 76 9978.0 77 7920.5 78 6337.5 79 5539.0 80 4899.0 81 3752.0 82 2890.5 83 2536.0 84 2250.0 85 1753.5 86 1308.0 87 1073.0 88 924.5 89 681.0 90 517.5 91 431.5 92 414.0 93 387.0 94 335.0 95 289.5 96 269.0 97 302.0 98 373.5 99 748.5 100 1085.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12856024047241535 2 0.3754081009162977 3 0.46652544221123293 4 0.3757812859579337 5 0.30441064993064176 6 0.37214975410115314 7 0.5291442871008029 8 0.3669853546539967 9 0.35640776573192645 10-14 0.31652913192785426 15-19 0.20140596059976534 20-24 0.13503439903344272 25-29 0.2018040246441771 30-34 0.1600795293438408 35-39 0.09569748545110027 40-44 0.061498487216185255 45-49 0.06320470527751464 50-54 0.06393743203668385 55-59 0.04158404931692491 60-64 0.023698453966601862 65-69 0.01814963379913648 70-74 0.015410535848375801 75-76 0.014736796402239384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 2.4920613E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 55.089546992198024 #Duplication Level Relative count 1 100.0 2 29.861245235069887 3 13.564421855146124 4 7.855654383735705 5 5.296060991105464 6 3.859720457433291 7 3.023125794155019 8 2.4742058449809403 9 2.1062261753494282 10++ 35.26302414231258 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 25674 0.10302314794583904 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25001 0.10032257232195693 No Hit >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 10895355 3.7596762 7.559924 2 TTTTT 10800315 3.7319453 6.824335 2 GTGTG 5160590 3.4567795 4.4046793 6 CACAC 5168310 3.431091 5.911703 7 ACACA 5906960 3.1529918 6.201835 6 TGTGT 5849445 3.1424072 4.4204016 7 CTGGA 3295260 2.2005258 5.861787 1 CTCCA 3249715 2.1579776 5.7746644 6 TCCAG 3129490 2.0839763 6.4257298 7 GTTTT 3765880 1.622519 6.8767314 1 GTTTG 3012425 1.6183186 5.812506 1 ATCCA 2288310 1.2217761 5.499171 6 >>END_MODULE