BLAST Results
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Edit and Resubmit [Sign in above to save your search strategy] Blast report description

ref|NM_101127.3| (1033 letters)

RID
XD9BZU35015 (Expires on 09-13 20:54 pm)
Query ID
NM_101127.3
Description
Arabidopsis thaliana alpha-expansin family protein mRNA, complete cds
Molecule type
nucleic acid
Query Length
1033
Database Name
nr
Description
Nucleotide collection (nt)
Program
BLASTN 2.5.0+

Alignments

GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana alpha-expansin family protein mRNA, complete cds
NM_101127.310331
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
1864 bits(2066) 0.0() 1033/1033(100%) 0/1033(0%) Plus/Plus
Query  1     CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1     CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60

Query  61    GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61    GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120

Query  121   TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121   TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180

Query  181   AGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCT  240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181   AGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCT  240

Query  241   ACGGACTGTCCACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCC  300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241   ACGGACTGTCCACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCC  300

Query  301   AATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGG  360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301   AATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGG  360

Query  361   TCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGT  420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361   TCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGT  420

Query  421   GCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACT  480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421   GCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACT  480

Query  481   GGAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTA  540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481   GGAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTA  540

Query  541   TGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTG  600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541   TGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTG  600

Query  601   GCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGA  660
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601   GCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGA  660

Query  661   GCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTT  720
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661   GCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTT  720

Query  721   TCCGGGTCACTTCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTA  780
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  721   TCCGGGTCACTTCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTA  780

Query  781   ACTGGAGCGGCGGTAAGACTTACAAGAGCACCGCTAATTTCCGTTAAAACTAGGCTTTTG  840
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781   ACTGGAGCGGCGGTAAGACTTACAAGAGCACCGCTAATTTCCGTTAAAACTAGGCTTTTG  840

Query  841   CCCTACCAAACGAAAACGGAGTTTTCTCTTCTCCTTCtttttttGTTAAGAGTTTCGGTG  900
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  841   CCCTACCAAACGAAAACGGAGTTTTCTCTTCTCCTTCTTTTTTTGTTAAGAGTTTCGGTG  900

Query  901   GCCTTTTGTTGTGGTGGCCCGGCTTTATGTTATACATCTACATGTATGTATAATGTATGT  960
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  901   GCCTTTTGTTGTGGTGGCCCGGCTTTATGTTATACATCTACATGTATGTATAATGTATGT  960

Query  961   ATGTATCTAATTGTGATATAACTCTTCTTATAAATATCATGAAGTCAACACTTCTTGATC  1020
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961   ATGTATCTAATTGTGATATAACTCTTCTTATAAATATCATGAAGTCAACACTTCTTGATC  1020

Query  1021  AAGAGAATTCGTT  1033
             |||||||||||||
Sbjct  1021  AAGAGAATTCGTT  1033


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)
BX815910.110331
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
1835 bits(2034) 0.0() 1029/1034(99%) 2/1034(0%) Plus/Plus
Query  1     CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1     CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60

Query  61    GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61    GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120

Query  121   TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121   TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180

Query  181   AGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCT  240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181   AGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCT  240

Query  241   ACGGACTGTCCACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCC  300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241   ACGGACTGTCCACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCC  300

Query  301   AATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGG  360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301   AATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGG  360

Query  361   TCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGT  420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361   TCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGT  420

Query  421   GCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACT  480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421   GCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACT  480

Query  481   GGAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTA  540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481   GGAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTA  540

Query  541   TGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTG  600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541   TGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTG  600

Query  601   GCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGA  660
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601   GCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGA  660

Query  661   GCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTT  720
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661   GCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTT  720

Query  721   TCCGGGTCACTTCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTA  780
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  721   TCCGGGTAACTTCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTA  780

Query  781   ACTGGAGCGGCGGTAAGACTTACAAGAGCACCGCTAATTTCCGTTAAAACTAGGCTTTTG  840
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781   ACTGGAGCGGCGGTAAGACTTACAAGAGCACCGCTAATTTCCGTTAAAACTAGGCTTTTG  840

Query  841   CCCTACCAAACGAAAACGGAGTTTTCTCTTCTCCTTCtttttttGTTAAGAGTTTCGGTG  900
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  841   CCCTACCAAACGAAAACGGAGTTTTCTCTTCTCCTTCTTTTTTTGTTAAGAGTTTCGGTG  900

Query  901   GCCTTTTGTTGTGGTGGCCCGGCTTTATGTTATACATCTACATG-TATGTATAATGTATG  959
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  901   GCCTTTTGTTGTGGTGGCCCGGCTTTATGTTATACATCTACATGCTATGTATAATGTATG  960

Query  960   TATGTATCTAATTGTGATATAACTCTTCTTATAAATATCATGAAGTCAACACTTCTTGAT  1019
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  961   TATGTATCTAATTGTGAAATAACTCTTCTTATAAATATCATGAAGTCAACACTTCTTGAT  1020

Query  1020  CAAGAGAATTCGTT  1033
             ||||| || |||||
Sbjct  1021  CAAGA-AAATCGTT  1033


GenBankGraphics Next Previous Descriptions
Brassica rapa expansin-A7 (EXPA7), mRNA
NM_001302073.17921

Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
980 bits(1086) 0.0() 693/792(88%) 3/792(0%) Plus/Plus
Query  39   ATGGGTCCAATCTCAAGTTCTTGGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTT  98
            ||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||| || 
Sbjct  1    ATGGGTCCAGTCTCAAGTTCTTGGAGCTTCAACAAATTCTTTGCTATAGTTTTCGTCGTA  60

Query  99   TTCGCCATCTCCGGCGAGTTCGTCGCTGGATACTATCGACCAGGCCCATGGAGATATGCT  158
            ||||| ||||| || ||||| ||||| ||||| ||    ||  |||| |||||||| |||
Sbjct  61   TTCGCTATCTCTGGTGAGTTTGTCGCCGGATATTACAAGCCCAGCCCGTGGAGATACGCT  120

Query  159  CACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGTAC  218
            || |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| 
Sbjct  121  CATGCCACTTTCTACGGCGACGAAACCGGTAGTGAAACCATGGGTGGTGCATGTGGGTAT  180

Query  219  GGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTGTTC  278
            |||||||| ||||||||||| |||||  || |||| ||||||||||||||||| ||||||
Sbjct  181  GGAAACCTGTTTAACAGCGGATACGGCTTGGCCACAGCGGCGCTAAGCACGACGTTGTTC  240

Query  279  AATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCGCATTGT  338
            || || ||||| ||||||||||||||||| || ||||  |||  ||| ||    ||||||
Sbjct  241  AAAGACGGTTATGGATGCGGCCAATGTTTCCAAATAATGTGTGTGAAGTCGAAACATTGT  300

Query  339  TACTCTGGAAA---ATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAATTGGTAC  395
            |||| ||||||   ||| || ||||||||||| || || |||||||||||||||||||||
Sbjct  301  TACTATGGAAACCCATCGACGGTGGTCACAGCTACAAACCTTTGCCCTCCTAATTGGTAC  360

Query  396  CAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCATTTCGATATGGCTAAA  455
            |||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||
Sbjct  361  CAAGACTCCAATAATGGTGGTTGGTGTAACCCTCCTAGAACCCATTTCGATATGGCTAAA  420

Query  456  CCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGCATACCGAAGA  515
            || |||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||
Sbjct  421  CCGGCTTTCATGAAACTCGCTAACTGGAAGGCCGGTATCATCCCTGTTGCATACCGCAGA  480

Query  516  GTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTT  575
            ||  ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||
Sbjct  481  GTCGCATGCAAAAGGAGTGGAGGTATGAGGTTTCAGTTCCAAGGCAATGCTTATTGGCTT  540

Query  576  CTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGT  635
            || |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||
Sbjct  541  CTCATCTTCGTCATGAATGTTGGCGGTGCCGGAGACATAAAGAGCATGGCCGTGAAAGGT  600

Query  636  AGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCC  695
            || ||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct  601  AGTCGGACTAATTGGATAAGCATGAGCCACAACTGGGGGGCTTCTTACCAAGCCTTTTCC  660

Query  696  TCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACCATC  755
            |||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||
Sbjct  661  TCTCTCTATGGTCAGTCCCTCTCTTTCCGGGTCACTTCTTACACAACCGGTGAAACCGTC  720

Query  756  TATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACCGCT  815
            ||||||||||||||||||||| ||||||||| ||  || | |||||||||||| |  || 
Sbjct  721  TATGCTTGGAACGTTGCTCCGTCTAACTGGAACGCTGGCATGACTTACAAGAGTAGTGCC  780

Query  816  AATTTCCGTTAA  827
            |||||||| |||
Sbjct  781  AATTTCCGCTAA  792


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana chromosome 1 sequence
CP002684.1304276718
PubChem BioAssay-bioactivity screening
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
940 bits(1042) 0.0() 521/521(100%) 0/521(0%) Plus/Plus
Query  513      AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277379  AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  4277438

Query  573      CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277439  CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  4277498

Query  633      GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277499  GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  4277558

Query  693      TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277559  TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  4277618

Query  753      ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  812
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277619  ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  4277678

Query  813      GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  872
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277679  GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  4277738

Query  873      CCTTCtttttttGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  932
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277739  CCTTCTTTTTTTGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  4277798

Query  933      TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  992
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277799  TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  4277858

Query  993      AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  1033
                |||||||||||||||||||||||||||||||||||||||||
Sbjct  4277859  AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  4277899


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
567 bits(628) 1e-157() 314/314(100%) 0/314(0%) Plus/Plus
Query  201      GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4276983  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  4277042

Query  261      CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277043  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  4277102

Query  321      TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277103  TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  4277162

Query  381      CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277163  CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  4277222

Query  441      TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4277223  TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  4277282

Query  501      GTTGCATACCGAAG  514
                ||||||||||||||
Sbjct  4277283  GTTGCATACCGAAG  4277296


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
367 bits(406) 2e-97() 203/203(100%) 0/203(0%) Plus/Plus
Query  1        CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4276519  CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  4276578

Query  61       GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4276579  GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  4276638

Query  121      TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4276639  TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  4276698

Query  181      AGACCGGTGGTGAAACCATGGGT  203
                |||||||||||||||||||||||
Sbjct  4276699  AGACCGGTGGTGAAACCATGGGT  4276721


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
262 bits(290) 7e-66() 243/308(79%) 0/308(0%) Plus/Plus
Query  513       AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
                 |||||| ||||  | | ||  ||||| || |||||  ||||  |||| |||   ||||||
Sbjct  23332620  AGAGTGGCATGTAAGAAGATCGGAGGAATAAGGTTCAAATTTGAAGGAAATGGATATTGG  23332679

Query  573       CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
                 || ||| | | ||| |||||||| |||||  | || |||||||||| |||||||||||||
Sbjct  23332680  CTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGACCATGGCCGTTAAA  23332739

Query  633       GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
                 |||||||| ||    ||||| | ||||||||| || |||||||| || |||||||| |||
Sbjct  23332740  GGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTTCGTACCAAGCCTTT  23332799

Query  693       TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
                 || |||||||| ||||| |||||||| |||||| |||| |||||||||||  || | |||
Sbjct  23332800  TCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACACCACTCGTCAGACC  23332859

Query  753       ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  812
                 || || ||||  || | ||||||||| | ||||||||  || ||||| ||| ||||||  
Sbjct  23332860  ATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGACCTACCAGAGCAAG  23332919

Query  813       GCTAATTT  820
                 ||||||||
Sbjct  23332920  GCTAATTT  23332927


Alignment statistics for match #5
ScoreExpectIdentitiesGapsStrandFrame
178 bits(196) 2e-40() 230/317(73%) 3/317(0%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                 ||||| || ||||| || || ||| | | | |||||||||||||  |  ||||| | |||
Sbjct  23332124  GGTGGGGCTTGTGGCTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCG  23332183

Query  261       CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                 || |||||  |  ||||||| || ||||| | |||||| |||||||| ||| |||  |||
Sbjct  23332184  CTGAGCACAGCCCTGTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGT  23332243

Query  321       TCGAAATCACCGCATTGTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTT  377
                   |   || ||  | || ||||  ||   | ||   || ||||| || || |||||  | 
Sbjct  23332244  GTGTCGTCGCCTAACTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATA  23332303

Query  378       TGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACC  437
                 || || || ||||    |||||  ||||||  |||||| ||||| ||||| ||  ||  |
Sbjct  23332304  TGTCCACCAAATTATGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTC  23332363

Query  438       CATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATC  497
                 ||||| ||| || ||||||||||||| |||||  ||||| |||||| ||| |||||||||
Sbjct  23332364  CATTTTGATTTGACTAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATC  23332423

Query  498       CCAGTTGCATACCGAAG  514
                 || ||  |||| || ||
Sbjct  23332424  CCCGTCTCATATCGCAG  23332440


Alignment statistics for match #6
ScoreExpectIdentitiesGapsStrandFrame
84.2 bits(92) 4e-12() 219/324(68%) 20/324(6%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                 || ||||| ||||| ||||||||||| | || |   ||||| |||     ||||||||||
Sbjct  26142261  GGAGGTGCTTGTGGATACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCG  26142320

Query  261       CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                 ||||||||| |  | |||||| |||||    | || ||    || ||  |||||| ||| 
Sbjct  26142321  CTAAGCACGGCTCTATTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-  26142379

Query  321       TCGAAATCACCG--CATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCT  376
                 || |||  |  |   || ||  ||  ||||    ||||  || ||||||||||| ||  |
Sbjct  26142380  TCAAAACGATGGAAAATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTT  26142436

Query  377       TTGCCCTCCTAA----TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-  431
                 ||||||||||||        |||| |     |||||| || |||||||| || |||||| 
Sbjct  26142437  TTGCCCTCCTAACAACGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTC  26142492

Query  432       AGAACCCATTTCGATATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGG  490
                 || |  ||||| ||| |  || | || |  |||||    | ||||| | |  || |||||
Sbjct  26142493  AGCA-GCATTTTGATCTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGG  26142550

Query  491       TATCATCCCAGTTGCATACCGAAG  514
                  ||  |||| || || ||||||||
Sbjct  26142551  CATTGTCCCCGTCGCTTACCGAAG  26142574


Alignment statistics for match #7
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 75/104(72%) 8/104(7%) Plus/Minus
Query  363      ACAGCCACCAATCTTTGCCCTCCTAA--TTGGTA--CCAAGACTCCAACGCTGGTGGTTG  418
                |||||||| ||  ||||||| || ||  ||| |   || | ||  |||||   |||||||
Sbjct  6999326  ACAGCCACTAACTTTTGCCCACCAAACTTTGCTTTGCCTA-ACAACAACG---GTGGTTG  6999271

Query  419      GTGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTT  462
                ||||||||| ||    |  |||||||| |||||  |||| ||||
Sbjct  6999270  GTGCAATCCGCCGCTTAAACATTTCGACATGGCACAACCCGCTT  6999227


Alignment statistics for match #8
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 49/62(79%) 2/62(3%) Plus/Plus
Query  143       CCCATGGAG-ATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGG  201
                 ||||||| | | |  |||| |||||||| ||||||||||| |||||  | | ||| ||||
Sbjct  23331814  CCCATGGCGTACAGCCTCA-GCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGG  23331872

Query  202       GT  203
                 ||
Sbjct  23331873  GT  23331874


GenBankGraphics Next Previous Descriptions
Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I, complete sequence
AC025417.41061423
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
940 bits(1042) 0.0() 521/521(100%) 0/521(0%) Plus/Plus
Query  513    AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27721  AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  27780

Query  573    CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27781  CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  27840

Query  633    GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27841  GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  27900

Query  693    TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27901  TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  27960

Query  753    ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  812
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27961  ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  28020

Query  813    GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  872
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  28021  GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  28080

Query  873    CCTTCtttttttGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  932
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  28081  CCTTCTTTTTTTGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  28140

Query  933    TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  992
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  28141  TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  28200

Query  993    AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  1033
              |||||||||||||||||||||||||||||||||||||||||
Sbjct  28201  AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  28241


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
567 bits(628) 1e-157() 314/314(100%) 0/314(0%) Plus/Plus
Query  201    GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27325  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  27384

Query  261    CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27385  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  27444

Query  321    TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27445  TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  27504

Query  381    CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27505  CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  27564

Query  441    TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  27565  TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  27624

Query  501    GTTGCATACCGAAG  514
              ||||||||||||||
Sbjct  27625  GTTGCATACCGAAG  27638


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
367 bits(406) 2e-97() 203/203(100%) 0/203(0%) Plus/Plus
Query  1      CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  26861  CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  26920

Query  61     GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  26921  GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  26980

Query  121    TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  26981  TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  27040

Query  181    AGACCGGTGGTGAAACCATGGGT  203
              |||||||||||||||||||||||
Sbjct  27041  AGACCGGTGGTGAAACCATGGGT  27063


GenBankGraphics Next Previous Descriptions
Genomic sequence for Arabidopsis thaliana BAC F5O11 from chromosome I, complete sequence
AC025416.41183743
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
940 bits(1042) 0.0() 521/521(100%) 0/521(0%) Plus/Plus
Query  513     AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106704  AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  106763

Query  573     CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106764  CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  106823

Query  633     GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106824  GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  106883

Query  693     TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106884  TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  106943

Query  753     ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  812
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106944  ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  107003

Query  813     GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  872
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107004  GCTAATTTCCGTTAAAACTAGGCTTTTGCCCTACCAAACGAAAACGGAGTTTTCTCTTCT  107063

Query  873     CCTTCtttttttGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  932
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107064  CCTTCTTTTTTTGTTAAGAGTTTCGGTGGCCTTTTGTTGTGGTGGCCCGGCTTTATGTTA  107123

Query  933     TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  992
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107124  TACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTGATATAACTCTTCTTATA  107183

Query  993     AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  1033
               |||||||||||||||||||||||||||||||||||||||||
Sbjct  107184  AATATCATGAAGTCAACACTTCTTGATCAAGAGAATTCGTT  107224


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
567 bits(628) 1e-157() 314/314(100%) 0/314(0%) Plus/Plus
Query  201     GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106308  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  106367

Query  261     CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106368  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  106427

Query  321     TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106428  TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  106487

Query  381     CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106488  CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  106547

Query  441     TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  106548  TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  106607

Query  501     GTTGCATACCGAAG  514
               ||||||||||||||
Sbjct  106608  GTTGCATACCGAAG  106621


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
367 bits(406) 2e-97() 203/203(100%) 0/203(0%) Plus/Plus
Query  1       CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105844  CAAAAACAAACCCTAAGAATAAAGAAAAAGAGGCTAGAATGGGTCCAATCTCAAGTTCTT  105903

Query  61      GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105904  GGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGCGAGTTCG  105963

Query  121     TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105964  TCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACG  106023

Query  181     AGACCGGTGGTGAAACCATGGGT  203
               |||||||||||||||||||||||
Sbjct  106024  AGACCGGTGGTGAAACCATGGGT  106046


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin A18 mRNA, complete cds
NM_104976.410021
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
477 bits(528) 2e-130() 517/682(76%) 5/682(0%) Plus/Plus
Query  143  CCCATGGAG-ATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGG  201
            ||||||| | | |  |||| |||||||| ||||||||||| |||||  | | ||| ||||
Sbjct  139  CCCATGGCGTACAGCCTCA-GCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGG  197

Query  202  GTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGC  261
            |||| || ||||| || || ||| | | | |||||||||||||  |  ||||| | ||||
Sbjct  198  GTGGGGCTTGTGGCTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCGC  257

Query  262  TAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTT  321
            | |||||  |  ||||||| || ||||| | |||||| |||||||| ||| |||  ||| 
Sbjct  258  TGAGCACAGCCCTGTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGTG  317

Query  322  CGAAATCACCGCATTGTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTTT  378
             |   || ||  | || ||||  ||   | ||   || ||||| || || |||||  | |
Sbjct  318  TGTCGTCGCCTAACTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATAT  377

Query  379  GCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCC  438
            | || || ||||    |||||  ||||||  |||||| ||||| ||||| ||  ||  ||
Sbjct  378  GTCCACCAAATTATGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTCC  437

Query  439  ATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCC  498
            |||| ||| || ||||||||||||| |||||  ||||| |||||| ||| ||||||||||
Sbjct  438  ATTTTGATTTGACTAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATCC  497

Query  499  CAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAG  558
            | ||  |||| || |||||| ||||  | | ||  ||||| || |||||  ||||  |||
Sbjct  498  CCGTCTCATATCGCAGAGTGGCATGTAAGAAGATCGGAGGAATAAGGTTCAAATTTGAAG  557

Query  559  GTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGA  618
            | |||   |||||||| ||| | | ||| |||||||| |||||  | || ||||||||||
Sbjct  558  GAAATGGATATTGGCTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGA  617

Query  619  GCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCT  678
             ||||||||||||||||||||| ||    ||||| | ||||||||| || |||||||| |
Sbjct  618  CCATGGCCGTTAAAGGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTT  677

Query  679  CTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACA  738
            | |||||||| ||||| |||||||| ||||| |||||||| |||||| |||| |||||||
Sbjct  678  CGTACCAAGCCTTTTCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACA  737

Query  739  CCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGA  798
            ||||  || | ||||| || ||||  || | ||||||||| | ||||||||  || ||||
Sbjct  738  CCACTCGTCAGACCATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGA  797

Query  799  CTTACAAGAGCACCGCTAATTT  820
            | ||| ||||||  ||||||||
Sbjct  798  CCTACCAGAGCAAGGCTAATTT  819


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana mRNA for Expansin-like protein, complete cds, clone: RAFL14-26-B20
AK227678.110121
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
477 bits(528) 2e-130() 517/682(76%) 5/682(0%) Plus/Plus
Query  143  CCCATGGAG-ATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGG  201
            ||||||| | | |  |||| |||||||| ||||||||||| |||||  | | ||| ||||
Sbjct  139  CCCATGGCGTACAGCCTCA-GCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGG  197

Query  202  GTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGC  261
            |||| || ||||| || || ||| | | | |||||||||||||  |  ||||| | ||||
Sbjct  198  GTGGGGCTTGTGGCTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCGC  257

Query  262  TAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTT  321
            | |||||  |  ||||||| || ||||| | |||||| |||||||| ||| |||  ||| 
Sbjct  258  TGAGCACAGCCCTGTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGTG  317

Query  322  CGAAATCACCGCATTGTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTTT  378
             |   || ||  | || ||||  ||   | ||   || ||||| || || |||||  | |
Sbjct  318  TGTCGTCGCCTAACTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATAT  377

Query  379  GCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCC  438
            | || || ||||    |||||  ||||||  |||||| ||||| ||||| ||  ||  ||
Sbjct  378  GTCCACCAAATTATGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTCC  437

Query  439  ATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCC  498
            |||| ||| || ||||||||||||| |||||  ||||| |||||| ||| ||||||||||
Sbjct  438  ATTTTGATTTGACTAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATCC  497

Query  499  CAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAG  558
            | ||  |||| || |||||| ||||  | | ||  ||||| || |||||  ||||  |||
Sbjct  498  CCGTCTCATATCGCAGAGTGGCATGTAAGAAGATCGGAGGAATAAGGTTCAAATTTGAAG  557

Query  559  GTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGA  618
            | |||   |||||||| ||| | | ||| |||||||| |||||  | || ||||||||||
Sbjct  558  GAAATGGATATTGGCTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGA  617

Query  619  GCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCT  678
             ||||||||||||||||||||| ||    ||||| | ||||||||| || |||||||| |
Sbjct  618  CCATGGCCGTTAAAGGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTT  677

Query  679  CTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACA  738
            | |||||||| ||||| |||||||| ||||| |||||||| |||||| |||| |||||||
Sbjct  678  CGTACCAAGCCTTTTCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACA  737

Query  739  CCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGA  798
            ||||  || | ||||| || ||||  || | ||||||||| | ||||||||  || ||||
Sbjct  738  CCACTCGTCAGACCATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGA  797

Query  799  CTTACAAGAGCACCGCTAATTT  820
            | ||| ||||||  ||||||||
Sbjct  798  CCTACCAGAGCAAGGCTAATTT  819


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana clone C00140 (g) putative expansin At-EXP6 protein (At1g62980) mRNA, complete cds
AF332444.17741

Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
477 bits(528) 2e-130() 517/682(76%) 5/682(0%) Plus/Plus
Query  143  CCCATGGAG-ATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGG  201
            ||||||| | | |  |||| |||||||| ||||||||||| |||||  | | ||| ||||
Sbjct  87   CCCATGGCGTACAGCCTCA-GCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGG  145

Query  202  GTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGC  261
            |||| || ||||| || || ||| | | | |||||||||||||  |  ||||| | ||||
Sbjct  146  GTGGGGCTTGTGGCTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCGC  205

Query  262  TAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTT  321
            | |||||  |  ||||||| || ||||| | |||||| |||||||| ||| |||  ||| 
Sbjct  206  TGAGCACAGCCCTGTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGTG  265

Query  322  CGAAATCACCGCATTGTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTTT  378
             |   || ||  | || ||||  ||   | ||   || ||||| || || |||||  | |
Sbjct  266  TGTCGTCGCCTAACTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATAT  325

Query  379  GCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCC  438
            | || || ||||    |||||  ||||||  |||||| ||||| ||||| ||  ||  ||
Sbjct  326  GTCCACCAAATTATGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTCC  385

Query  439  ATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCC  498
            |||| ||| || ||||||||||||| |||||  ||||| |||||| ||| ||||||||||
Sbjct  386  ATTTTGATTTGACTAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATCC  445

Query  499  CAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAG  558
            | ||  |||| || |||||| ||||  | | ||  ||||| || |||||  ||||  |||
Sbjct  446  CCGTCTCATATCGCAGAGTGGCATGTAAGAAGATCGGAGGAATAAGGTTCAAATTTGAAG  505

Query  559  GTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGA  618
            | |||   |||||||| ||| | | ||| |||||||| |||||  | || ||||||||||
Sbjct  506  GAAATGGATATTGGCTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGA  565

Query  619  GCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCT  678
             ||||||||||||||||||||| ||    ||||| | ||||||||| || |||||||| |
Sbjct  566  CCATGGCCGTTAAAGGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTT  625

Query  679  CTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACA  738
            | |||||||| ||||| |||||||| ||||| |||||||| |||||| |||| |||||||
Sbjct  626  CGTACCAAGCCTTTTCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACA  685

Query  739  CCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGA  798
            ||||  || | ||||| || ||||  || | ||||||||| | ||||||||  || ||||
Sbjct  686  CCACTCGTCAGACCATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGA  745

Query  799  CTTACAAGAGCACCGCTAATTT  820
            | ||| ||||||  ||||||||
Sbjct  746  CCTACCAGAGCAAGGCTAATTT  767


GenBankGraphics Next Previous Descriptions
Brassica oleracea var. capitata expansin gene, complete sequence
DQ899785.114593
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
425 bits(470) 1e-114() 295/335(88%) 0/335(0%) Plus/Plus
Query  505   CATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATT  564
             ||||  | |||||  ||||| ||||||||||||||||||||||||| |||||||| ||| 
Sbjct  1050  CATAATGTAGAGTCGCATGCAAAAGGAGTGGAGGTATGAGGTTTCAGTTCCAAGGCAATG  1109

Query  565   CTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGG  624
             ||||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||
Sbjct  1110  CTTATTGGCTTCTCATCTTCGTCATGAATGTTGGCGGTGCCGGAGACATAAAGAGCATGG  1169

Query  625   CCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACC  684
             |||| |||||||| ||||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct  1170  CCGTGAAAGGTAGTCGGACTAATTGGATAAGCATGAGCCACAACTGGGGGGCTTCTTACC  1229

Query  685   AAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCG  744
             |||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct  1230  AAGCCTTTTCCTCTCTCTATGGTCAGTCCCTCTCTTTCCGGGTCACTTCTTACACAACCG  1289

Query  745   GTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACA  804
             |||||||| ||||||||||||||||||||||| |||||||||  |  |||| ||||||||
Sbjct  1290  GTGAAACCGTCTATGCTTGGAACGTTGCTCCGTCTAACTGGAATGCTGGTATGACTTACA  1349

Query  805   AGAGCACCGCTAATTTCCGTTAAAACTAGGCTTTT  839
             |||| | ||| |||||||| | ||  || | ||||
Sbjct  1350  AGAGTAGCGCCAATTTCCGCTGAACTTACGGTTTT  1384


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
390 bits(432) 2e-104() 278/317(88%) 4/317(1%) Plus/Plus
Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            ||||||||||||||||| |||||||| ||||||||||| |||||  || |||| ||||||
Sbjct  603  GGTGGTGCATGTGGGTATGGAAACCTGTTTAACAGCGGATACGGCTTGGCCACAGCGGCG  662

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
            ||||||||||| |||||||| || ||||||||||||||||||||||| || ||||  |||
Sbjct  663  CTAAGCACGACGTTGTTCAAAGACGGTTACGGATGCGGCCAATGTTT-CAAATAATGTGT  721

Query  321  TCGAAATCACCGCATTGTTACTCTGGAAA---ATCAACAGTGGTCACAGCCACCAATCTT  377
              ||| ||    |||||||||| ||||||   ||| || |||||||||||||| || |||
Sbjct  722  GTGAAGTCGAAACATTGTTACTATGGAAACCCATCGACGGTGGTCACAGCCACAAACCTT  781

Query  378  TGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACC  437
            |||||||||||||||||||||||||||||   |||||||||||| || ||||||||||||
Sbjct  782  TGCCCTCCTAATTGGTACCAAGACTCCAATAATGGTGGTTGGTGTAACCCTCCTAGAACC  841

Query  438  CATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATC  497
            |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||
Sbjct  842  CATTTCGATATGGCTAAACCGGCTTTCATGAAACTCGCTAACTGGAAGGCCGGTATCATC  901

Query  498  CCAGTTGCATACCGAAG  514
            || ||||||||||| ||
Sbjct  902  CCTGTTGCATACCGCAG  918


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
181 bits(200) 2e-41() 139/165(84%) 0/165(0%) Plus/Plus
Query  39   ATGGGTCCAATCTCAAGTTCTTGGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTT  98
            ||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||| || 
Sbjct  332  ATGGGTCCAGTCTCAAGTTCTTGGAGCTTCAACAAATTCTTTGCTATAGTTTTCGTCGTC  391

Query  99   TTCGCCATCTCCGGCGAGTTCGTCGCTGGATACTATCGACCAGGCCCATGGAGATATGCT  158
            ||||| ||||| || ||||| ||||| ||||| ||    ||  |||| |||||||| |||
Sbjct  392  TTCGCTATCTCTGGTGAGTTTGTCGCCGGATATTACAAGCCCAGCCCGTGGAGATACGCT  451

Query  159  CACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGT  203
            || |||||||||||||| || || |||||| ||||||||||||||
Sbjct  452  CATGCCACTTTCTACGGCGATGAAACCGGTAGTGAAACCATGGGT  496


GenBankGraphics Next Previous Descriptions
Raphanus sativus expansin (EXPA7) gene, complete sequence
DQ899792.112473
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
403 bits(446) 3e-108() 280/317(88%) 3/317(0%) Plus/Plus
Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            |||||||||||||| ||||||||||| | ||||||||||||||| ||| |||||||||||
Sbjct  460  GGTGGTGCATGTGGATACGGAAACCTGTATAACAGCGGCTACGGCCTGGCCACGGCGGCG  519

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
            ||||||||||| |||||||| || ||||||||||||||||||||||| || ||||  |||
Sbjct  520  CTAAGCACGACGTTGTTCAAAGACGGTTACGGATGCGGCCAATGTTTCCAAATAATGTGT  579

Query  321  TCGAAATCACCGCATTGTTACTCTGGAAA---ATCAACAGTGGTCACAGCCACCAATCTT  377
              | | |||   |||||||||| ||||||   ||| || ||||||||||||||||| |||
Sbjct  580  GTGCAGTCAAAACATTGTTACTATGGAAACCCATCTACGGTGGTCACAGCCACCAACCTT  639

Query  378  TGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACC  437
            ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct  640  TGCCCTCCTAATTGGTACCAAGACTCCAACAATGGTGGTTGGTGCAATCCTCCTAGAACC  699

Query  438  CATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATC  497
            |||||||||||||||||||| |||||||||||||| ||| ||||||  || |||||||||
Sbjct  700  CATTTCGATATGGCTAAACCGGCTTTCATGAAACTTGCTAACTGGAAAGCTGGTATCATC  759

Query  498  CCAGTTGCATACCGAAG  514
            || ||| ||||||| ||
Sbjct  760  CCTGTTTCATACCGCAG  776


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
385 bits(426) 9e-103() 246/268(92%) 0/268(0%) Plus/Plus
Query  513   AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
             ||||| |||||| |||| |||||||||||| ||||||| |||||||| ||||| || |||
Sbjct  980   AGAGTACCATGCAAAAGAAGTGGAGGTATGCGGTTTCAGTTCCAAGGCAATTCATACTGG  1039

Query  573   CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
             |||||||||||||||||||| || || |||||||| |||||||||||||||||||| |||
Sbjct  1040  CTTCTTATCTTCGTCATGAATGTCGGCGGCGCCGGTGACATCAAGAGCATGGCCGTGAAA  1099

Query  633   GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  1100  GGTAGCCGGACGAATTGGATAAGCATGAGCCACAACTGGGGAGCCTCTTACCAAGCTTTT  1159

Query  693   TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
             || |||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| 
Sbjct  1160  TCTTCTCTCTACGGTCAGTCTCTCTCTTTCCGGGTTACTTCTTACACCACTGGTGAAACT  1219

Query  753   ATCTATGCTTGGAACGTTGCTCCGGCTA  780
              ||||||||||||||||||||||| |||
Sbjct  1220  GTCTATGCTTGGAACGTTGCTCCGTCTA  1247


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
199 bits(220) 7e-47() 170/210(81%) 10/210(4%) Plus/Plus
Query  4    AAACAAACCCTAAGAATAA---------AGAAAAAGAGGCTAGA-ATGGGTCCAATCTCA  53
            |||||||||||||||| |          |||||| ||  ||||| |||||||| ||||||
Sbjct  16   AAACAAACCCTAAGAAAACCCATCCAAGAGAAAACGAAACTAGAGATGGGTCCGATCTCA  75

Query  54   AGTTCTTGGAGCTTTAACAAATTCTTCTCAATAGTTTTCGTTGTTTTCGCCATCTCCGGC  113
            |||| ||||||||| || || |||||| ||||||| ||||| ||||||||||||||||| 
Sbjct  76   AGTTTTTGGAGCTTCAAAAAGTTCTTCGCAATAGTCTTCGTCGTTTTCGCCATCTCCGGT  135

Query  114  GAGTTCGTCGCTGGATACTATCGACCAGGCCCATGGAGATATGCTCACGCCACTTTCTAC  173
            |||||||| || ||||| ||  | ||  |||| |||||||| ||||| ||||||||||| 
Sbjct  136  GAGTTCGTTGCCGGATATTACAGGCCGAGCCCCTGGAGATACGCTCATGCCACTTTCTAT  195

Query  174  GGTGACGAGACCGGTGGTGAAACCATGGGT  203
            || |||||||| ||  ||||||||||||||
Sbjct  196  GGCGACGAGACAGGGAGTGAAACCATGGGT  225


GenBankGraphics Next Previous Descriptions
Medicago truncatula clone JCVI-FLMt-14D7 unknown mRNA
BT133805.110971
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
291 bits(322) 1e-74() 455/644(71%) 15/644(2%) Plus/Plus
Query  155  TGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGG  214
            |||||| ||||| || || || || || || | |  |||||||||||| || ||||||||
Sbjct  193  TGCTCATGCCACCTTTTATGGAGATGAAACTGCTTCTGAAACCATGGGAGGAGCATGTGG  252

Query  215  GTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGCGCTAAGCACGACAT  273
             || |||||| | ||| | |  || ||||| || |   |||| |||  ||||| ||||||
Sbjct  253  ATATGGAAACTTGTTTCAGAATGGTTACGGGACAGAT-ACGGTGGCTTTAAGCTCGACAT  311

Query  274  TGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACC-G  332
            |||||||  ||||||| |  |||||   |||||| ||||| | ||| |   |||||   |
Sbjct  312  TGTTCAACAATGGTTATGCGTGCGGGACATGTTTCCAGATTAAATGCTACCAATCAAGTG  371

Query  333  CATTGTTACTCTGGAAAA-------TCAACAGTGGTCACAGCCACCAATCTTTGCCCTCC  385
            ||| ||||   | ||||        ||| || || |||| ||||||||||||||||||||
Sbjct  372  CAT-GTTA---TAGAAATGTGGCCTTCACCACTG-TCACTGCCACCAATCTTTGCCCTCC  426

Query  386  TAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCATTTCGA  445
            |||||||| | ||  |||  |   |||||| ||||| || || ||  ||   ||||| ||
Sbjct  427  TAATTGGTCCAAACCCTCTGATAATGGTGGATGGTGTAACCCACCACGAGTTCATTTTGA  486

Query  446  TATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             ||||| || || |||||||||||| | ||  | ||||  || |||||| |||| ||   
Sbjct  487  CATGGCCAAGCCTGCTTTCATGAAAATTGCACAGTGGAAAGCTGGTATCGTCCCTGTCAT  546

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTC  565
             ||||| || ||| |||||||||| |  ||||| ||  | |||   |||||||| ||   
Sbjct  547  GTACCGCAGGGTGTCATGCCAAAGAAAGGGAGGGATTCGATTTTCTTTCCAAGGAAACGG  606

Query  566  TTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGC  625
             || |||||  |  | |  || |||||||| || || |  ||||| ||   |||||||  
Sbjct  607  GTACTGGCTATTGGTGTATGTGATGAACGTCGGAGGTGGAGGAGATATGTCGAGCATGAT  666

Query  626  CGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCA  685
             || ||||| ||| | ||    ||||| |  |||||||| || ||||| || || |||||
Sbjct  667  GGTGAAAGGAAGCAGAACAGGATGGATTAAGATGAGCCATAACTGGGGTGCTTCCTACCA  726

Query  686  AGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGG  745
            | | ||| |  | ||   ||||||| |||| |||||| || | ||||| ||||||||   
Sbjct  727  AACATTTGCAACACTAGGTGGTCAAGCTCTTTCTTTCAGGCTTACTTCATACACCACTAA  786

Query  746  TGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCG  789
             || || ||   ||| ||||| ||||||||  | || |||| ||
Sbjct  787  GGAGACTATTATTGCATGGAATGTTGCTCCTTCCAATTGGAACG  830


GenBankGraphics Next Previous Descriptions
Medicago truncatula expansin (EXPA8) gene, complete sequence
DQ899791.16381
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
275 bits(304) 1e-69() 423/596(71%) 17/596(2%) Plus/Plus
Query  191  TGAAAC--CATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACT  247
            ||||||  |||||| || |||||||| || |||||| | ||| | |  || ||||| || 
Sbjct  43   TGAAACTGCATGGGAGGAGCATGTGGATATGGAAACTTGTTTCAGAATGGTTACGGGACA  102

Query  248  GTCCACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTT  307
            |   |||| |||  ||||| |||||||||||||  ||||||| |  |||||   ||||||
Sbjct  103  GAT-ACGGTGGCTTTAAGCTCGACATTGTTCAACAATGGTTATGCGTGCGGGACATGTTT  161

Query  308  TCAGATAACATGTTCGAAATCACC-GCATTGTTACTCTGGAAAA-------TCAACAGTG  359
             ||||| | ||| |   |||||   |||| ||||   | ||||        ||| || ||
Sbjct  162  CCAGATTAAATGCTACCAATCAAGTGCAT-GTTA---TAGAAATGTGGCCTTCACCACTG  217

Query  360  GTCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGG  419
             |||| |||||||||||||||||||||||||||| | ||  |||  |   |||||| |||
Sbjct  218  -TCACTGCCACCAATCTTTGCCCTCCTAATTGGTCCAAACCCTCTGATAATGGTGGATGG  276

Query  420  TGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTAC  479
            || || || ||  ||   ||||| || ||||| || || |||||||||||| | ||  | 
Sbjct  277  TGTAACCCACCACGAGTTCATTTTGACATGGCCAAGCCTGCTTTCATGAAAATTGCACAG  336

Query  480  TGGAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGT  539
            ||||  || |||||| |||| ||    ||||| || |||||||||||||| |  ||||| 
Sbjct  337  TGGAAAGCTGGTATCGTCCCTGTCATGTACCGCAGGGTGCCATGCCAAAGAAAGGGAGGG  396

Query  540  ATGAGGTTTCAATTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGT  599
            ||  | |||   |||||||| ||    || |||||  |  | |  || |||||||| || 
Sbjct  397  ATTCGATTTTCTTTCCAAGGAAACGGGTACTGGCTATTGGTGTATGTGATGAACGTCGGA  456

Query  600  GGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATG  659
            || |  ||||| ||   |||||||   || ||||| ||| | ||    ||||| |  |||
Sbjct  457  GGTGGAGGAGATATGTCGAGCATGATGGTGAAAGGAAGCAGAACAGGATGGATTAAGATG  516

Query  660  AGCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCT  719
            ||||| || ||||| || || |||||||| ||| |  | ||   ||||||| |||| |||
Sbjct  517  AGCCATAACTGGGGTGCTTCCTACCAAGCATTTGCAACACTAGGTGGTCAAGCTCTTTCT  576

Query  720  TTCCGGGTCACTTCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCC  775
            ||| || | ||||| ||||||||    || || ||   ||| ||||| ||||||||
Sbjct  577  TTCAGGCTTACTTCATACACCACTAAGGAGACTATTATTGCATGGAATGTTGCTCC  632


GenBankGraphics Next Previous Descriptions
Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete sequence
AC011000.3984123
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
262 bits(290) 7e-66() 243/308(79%) 0/308(0%) Plus/Plus
Query  513    AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
              |||||| ||||  | | ||  ||||| || |||||  ||||  |||| |||   ||||||
Sbjct  58987  AGAGTGGCATGTAAGAAGATCGGAGGAATAAGGTTCAAATTTGAAGGAAATGGATATTGG  59046

Query  573    CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
              || ||| | | ||| |||||||| |||||  | || |||||||||| |||||||||||||
Sbjct  59047  CTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGACCATGGCCGTTAAA  59106

Query  633    GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
              |||||||| ||    ||||| | ||||||||| || |||||||| || |||||||| |||
Sbjct  59107  GGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTTCGTACCAAGCCTTT  59166

Query  693    TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
              || |||||||| ||||| |||||||| |||||| |||| |||||||||||  || | |||
Sbjct  59167  TCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACACCACTCGTCAGACC  59226

Query  753    ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAAGACTTACAAGAGCACC  812
              || || ||||  || | ||||||||| | ||||||||  || ||||| ||| ||||||  
Sbjct  59227  ATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGACCTACCAGAGCAAG  59286

Query  813    GCTAATTT  820
              ||||||||
Sbjct  59287  GCTAATTT  59294


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
178 bits(196) 2e-40() 230/317(73%) 3/317(0%) Plus/Plus
Query  201    GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
              ||||| || ||||| || || ||| | | | |||||||||||||  |  ||||| | |||
Sbjct  58491  GGTGGGGCTTGTGGCTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCG  58550

Query  261    CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
              || |||||  |  ||||||| || ||||| | |||||| |||||||| ||| |||  |||
Sbjct  58551  CTGAGCACAGCCCTGTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGT  58610

Query  321    TCGAAATCACCGCATTGTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTT  377
                |   || ||  | || ||||  ||   | ||   || ||||| || || |||||  | 
Sbjct  58611  GTGTCGTCGCCTAACTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATA  58670

Query  378    TGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACC  437
              || || || ||||    |||||  ||||||  |||||| ||||| ||||| ||  ||  |
Sbjct  58671  TGTCCACCAAATTATGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTC  58730

Query  438    CATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATC  497
              ||||| ||| || ||||||||||||| |||||  ||||| |||||| ||| |||||||||
Sbjct  58731  CATTTTGATTTGACTAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATC  58790

Query  498    CCAGTTGCATACCGAAG  514
              || ||  |||| || ||
Sbjct  58791  CCCGTCTCATATCGCAG  58807


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 49/62(79%) 2/62(3%) Plus/Plus
Query  143    CCCATGGAG-ATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGG  201
              ||||||| | | |  |||| |||||||| ||||||||||| |||||  | | ||| ||||
Sbjct  58181  CCCATGGCGTACAGCCTCA-GCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGG  58239

Query  202    GT  203
              ||
Sbjct  58240  GT  58241


GenBankGraphics Next Previous Descriptions
Medicago truncatula expansin gene, complete sequence
DQ899790.113861
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
241 bits(266) 2e-59() 445/647(69%) 7/647(1%) Plus/Plus
Query  144   CCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGT  203
             |||||||    ||| || ||||| || || || || ||||| | |  ||  |||||||| 
Sbjct  504   CCATGGACTCTTGCACATGCCACATTTTATGGCGATGAGACAGCTTCTGCCACCATGGGA  563

Query  204   GGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGCGCT  262
             || ||||||||||| || ||  | |||   | ||| || || || | | || || ||  |
Sbjct  564   GGAGCATGTGGGTATGGGAATTTGTTTGTGAACGGTTATGGGACAGAC-ACAGCAGCATT  622

Query  263   AAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTC  322
              ||  | |||||||||||| |||| || | ||| ||    |||| ||| |||| ||||  
Sbjct  623   GAGTTCAACATTGTTCAATAATGGGTATGCATGTGGGACTTGTTATCAAATAAAATGTGT  682

Query  323   GAAATC-ACCGCATTGTTACTC---TGGAAAATCAACAGTGGTCACAGCCACCAATCTTT  378
               |||| |  |||| || || |   ||     |  ||    ||||| ||||| ||| |||
Sbjct  683   TCAATCGAGTGCAT-GTAACACCAATGTTCCTTACACTACAGTCACTGCCACAAATATTT  741

Query  379   GCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCC  438
             |||||||||||||||  || | |||  |    ||||| |||||||| || ||  |  | |
Sbjct  742   GCCCTCCTAATTGGTCTCAGGCCTCTGATAACGGTGGATGGTGCAACCCACCACGTTCAC  801

Query  439   ATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCC  498
             |||| || ||| |||| || |||||||||||| | ||| | |||| ||| ||||||  ||
Sbjct  802   ATTTTGACATGCCTAAGCCTGCTTTCATGAAAATTGCTCAGTGGAAGGCTGGTATCCGCC  861

Query  499   CAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAG  558
             | |||   || || | ||| || |||   || |||| |||  |  | ||    |||||||
Sbjct  862   CTGTTATGTATCGCACAGTACCTTGCGTGAGAAGTGAAGGATTTCGATTCTCTTTCCAAG  921

Query  559   GTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGA  618
             | |||   |||||| |  |  | | ||| ||||| || || || |  || || ||    |
Sbjct  922   GAAATGGATATTGGTTATTGGTGTACGTGATGAATGTGGGAGGTGGAGGTGATATAGCAA  981

Query  619   GCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCT  678
              ||||   |||||||| ||  | ||    ||||| |||||||||||||||||||| || |
Sbjct  982   ACATGTGGGTTAAAGGAAGTAGAACAGGATGGATTAGCATGAGCCACAATTGGGGTGCTT  1041

Query  679   CTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACA  738
             |||||||||| ||| |  | ||   ||| ||| |||| ||||||  | | ||||||||||
Sbjct  1042  CTTACCAAGCATTTGCAACACTTAGTGGCCAAACTCTTTCTTTCAAGATTACTTCTTACA  1101

Query  739   CCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGG  785
             | |||   ||||| ||    |||||||| ||||||||  | ||||||
Sbjct  1102  CAACCAAAGAAACTATAATAGCTTGGAATGTTGCTCCTTCCAACTGG  1148


GenBankGraphics Next Previous Descriptions
Medicago truncatula clone JCVI-FLMt-13E17 unknown mRNA
BT149207.110671
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
239 bits(264) 8e-59() 447/649(69%) 11/649(1%) Plus/Plus
Query  144  CCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGT  203
            |||||||    ||| || ||||| || || || || ||||| | |  ||  |||||||| 
Sbjct  150  CCATGGACTCTTGCACATGCCACATTTTATGGCGATGAGACAGCTTCTGCCACCATGGGA  209

Query  204  GGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGCGCT  262
            || ||||||||||| || ||  | |||   | ||| || || || | | || || ||  |
Sbjct  210  GGAGCATGTGGGTATGGGAATTTGTTTGTGAACGGTTATGGGACAGAC-ACAGCAGCATT  268

Query  263  AAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTC  322
             ||  | |||||||||||| |||| || | ||| ||    |||| ||| |||| ||||  
Sbjct  269  GAGTTCAACATTGTTCAATAATGGGTATGCATGTGGGACTTGTTATCAAATAAAATGTGT  328

Query  323  GAAATC-ACCGCATTGTTACTC---TGGAAAATCAACAGTGGTCACAGCCACCAATCTTT  378
              |||| |  |||| || || |   ||     |  ||    ||||| ||||| ||| |||
Sbjct  329  TCAATCGAGTGCAT-GTAACACCAATGTTCCTTACACTACAGTCACTGCCACAAATATTT  387

Query  379  GCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCC  438
            ||||||||||| |||  || | |||  |    ||||| |||||||| || ||  |  | |
Sbjct  388  GCCCTCCTAATCGGTCTCAGGCCTCTGATAACGGTGGATGGTGCAACCCACCACGTTCAC  447

Query  439  ATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCC  498
            |||| || ||| |||| || |||||||||||| | ||| | |||| ||| |||||| |||
Sbjct  448  ATTTTGACATGTCTAAGCCTGCTTTCATGAAAATTGCTCAGTGGAAGGCTGGTATCGTCC  507

Query  499  CAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAG  558
            | |||   || ||  |||| || |||   || |||| |||  |  | ||    |||||||
Sbjct  508  CTGTTATGTATCGCGGAGTACCTTGCGTGAGAAGTGAAGGATTTCGATTCTCTTTCCAAG  567

Query  559  GTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACAT--CAA  616
            | |||   |||||| |  |  | | ||| ||||| || || || |  || || ||  |||
Sbjct  568  GAAATGGATATTGGTTATTGGTGTACGTGATGAATGTGGGAGGTGGAGGTGATATATCAA  627

Query  617  GAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGC  676
               | |||  |||||||| ||  | ||    ||||| |||||||||||||||||||| ||
Sbjct  628  ACACGTGG--GTTAAAGGAAGTAGAACAGGATGGATTAGCATGAGCCACAATTGGGGTGC  685

Query  677  CTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTA  736
             ||||||||||| ||| |  | ||   ||| ||| |||| ||||||  | | ||||||||
Sbjct  686  TTCTTACCAAGCATTTGCAACACTTAGTGGCCAAACTCTTTCTTTCAAGATTACTTCTTA  745

Query  737  CACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGG  785
            ||| |||   ||||| ||    |||||||| ||||||||  | ||||||
Sbjct  746  CACAACCAAAGAAACTATAATAGCTTGGAATGTTGCTCCTTCCAACTGG  794


GenBankGraphics Next Previous Descriptions
Brassica rapa alpha-expansin protein 18 (EXPA18) mRNA, partial cds
KC621278.14741
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
228 bits(252) 1e-55() 303/419(72%) 4/419(0%) Plus/Plus
Query  157  CTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGGT  216
            |||| ||||| || ||||| || || || |   | |||||||||||||| || ||||| |
Sbjct  57   CTCA-GCCACCTTTTACGGGGATGAAACTGCCCGCGAAACCATGGGTGGGGCTTGTGGCT  115

Query  217  ACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTGT  276
            | || ||||| |  ||||||||||||||     ||||| ||||  |||| ||     |||
Sbjct  116  ATGGCAACCTATGGAACAGCGGCTACGGTGCAGCCACGTCGGCATTAAGTACAGTGCTGT  175

Query  277  TCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCGCATT  336
            |||| |||||||||   ||||| || ||||| || ||||  |||  |   || ||  | |
Sbjct  176  TCAACGATGGTTACTCGTGCGGTCAGTGTTTCCAAATAAGGTGTGTGTCGTCGCCTAACT  235

Query  337  GTTACTCTGGAAAATCA---ACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAATTGGT  393
            | ||||  ||   | ||   || ||||| || || |||||  | || || || |||||| 
Sbjct  236  GCTACTACGGTTCACCAGCCACCGTGGTGACTGCAACCAACATATGTCCACCGAATTGGG  295

Query  394  ACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCATTTCGATATGGCTA  453
              ||| | ||||||   ||||| ||||| ||||| ||  |  ||||||| ||| || |||
Sbjct  296  GTCAAAATTCCAACAACGGTGGGTGGTGTAATCCGCCACGTGCCCATTTTGATCTGACTA  355

Query  454  AACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGCATACCGAA  513
            |||| |||||||||||| ||||  | |||| ||| |||||||||||  |  ||||||| |
Sbjct  356  AACCGGCTTTCATGAAAATCGCAAATTGGAAGGCTGGTATCATCCCCATCTCATACCGGA  415

Query  514  GAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
            ||||| | ||| |||||| |||||| || |||||  ||||  |||| |||   ||||||
Sbjct  416  GAGTGGCTTGCAAAAGGACTGGAGGAATAAGGTTCAAATTTGAAGGAAATGGATATTGG  474


GenBankGraphics Next Previous Descriptions
Cucumis melo genomic chromosome, chr_6
LN713260.1359398594
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
188 bits(208) 1e-43() 409/609(67%) 5/609(0%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                 || || || ||||| || |||||| | || |  |  || || ||  |    |||| ||| 
Sbjct  32826830  GGAGGAGCTTGTGGTTATGGAAACTTGTTCACAAATGGGTATGGCGTTGATACGGTGGCT  32826889

Query  261       CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                 |||||| | ||| | |||||  |||| ||||  || ||    || ||||| || | ||||
Sbjct  32826890  CTAAGCTCTACACTCTTCAACAATGGCTACGCTTGTGGAACTTGCTTTCAAATCAAATGT  32826949

Query  321       TCGAAATC-ACCGCATTGTTACTCT---GGAAAATCAACAGTGGTCACAGCCACCAATCT  376
                  |  |||| |  || |||||||  |   |     |  ||   ||| || || ||||| ||
Sbjct  32826950  GCTCAATCCAAAGC-TTGTTACCGTAATGTTGCTTTCACGACGGTGACTGCAACCAACCT  32827008

Query  377       TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
                 |||||| || ||||||    ||   ||  ||   || || |||||||| ||||| ||   
Sbjct  32827009  TTGCCCGCCAAATTGGGCTAAACCTTCGGACAACGGCGGATGGTGCAACCCTCCGAGGGT  32827068

Query  437       CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
                  || ||||| ||| | || ||||| || |||||  ||||  | |||| ||| || |||||
Sbjct  32827069  TCACTTCGACATGTCGAAGCCAGCGTTTATGAAGATCGCCAATTGGAAGGCTGGGATCAT  32827128

Query  497       CCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCA  556
                 ||| || |  |||||| | || || |||   |  |  || ||  |  ||||   ||| ||
Sbjct  32827129  CCCTGTCGTGTACCGACGTGTCCCGTGCGGTAAAAAAGGCGGCCTTCGGTTCACATTACA  32827188

Query  557       AGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAA  616
                 ||| |||   || |||||| |    | ||| |||||||| ||||||| ||| ||| |   
Sbjct  32827189  AGGAAATGGCTACTGGCTTTTGGCGTACGTGATGAACGTCGGTGGCGGCGGCGACGTGTC  32827248

Query  617       GAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGC  676
                 | | |||   || ||||| |||   ||   |||||| |  |||||||| || ||||||||
Sbjct  32827249  GGGAATGTGGGTGAAAGGGAGCAAAACAGGTTGGATCAAAATGAGCCATAACTGGGGAGC  32827308

Query  677       CTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTA  736
                  || || ||||| |||||  || |   ||| |||||| | |||||  |  ||||||||||
Sbjct  32827309  TTCATATCAAGCATTTTCAACTTTGGTTGGCCAATCTTTGTCTTTTAGAATCACTTCTTA  32827368

Query  737       CACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAA  796
                 ||| |||   || ||||||   |||||||||||||||||  |||  |||||    |||  
Sbjct  32827369  CACAACCAAAGAGACCATCACAGCTTGGAACGTTGCTCCTTCTAGTTGGAGGTTTGGTTT  32827428

Query  797       GACTTACAA  805
                 ||| |||||
Sbjct  32827429  GACCTACAA  32827437


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 44/53(83%) 4/53(7%) Plus/Minus
Query  930       TTATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGTGATATAA  981
                 ||||| || || ||||||||||  |||||||||||||| ||  ||| ||||||
Sbjct  28979865  TTATATATATATATGTATGTATGTATGTATGTATGTATGTA--TGT-ATATAA  28979816


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 34/39(87%) 1/39(2%) Plus/Plus
Query  932      ATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                |||||| || || |||||||| |||||||||||||| ||
Sbjct  5164097  ATACATATATATATATGTATATATGTATGTATGTATGTA  5164135


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 34/39(87%) 1/39(2%) Plus/Minus
Query  942       ATGTATGTATAATGTATGTATGTATCTAATTGTGATATA  980
                 ||||||||||| ||||||||||||| ||  ||| |||||
Sbjct  35076270  ATGTATGTATA-TGTATGTATGTATGTATGTGTAATATA  35076233


GenBankGraphics Next Previous Descriptions
Cucumis melo genomic scaffold, anchoredscaffold00021
LN681860.155632232
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
188 bits(208) 1e-43() 409/609(67%) 5/609(0%) Plus/Minus
Query  201      GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                || || || ||||| || |||||| | || |  |  || || ||  |    |||| ||| 
Sbjct  3113030  GGAGGAGCTTGTGGTTATGGAAACTTGTTCACAAATGGGTATGGCGTTGATACGGTGGCT  3112971

Query  261      CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                |||||| | ||| | |||||  |||| ||||  || ||    || ||||| || | ||||
Sbjct  3112970  CTAAGCTCTACACTCTTCAACAATGGCTACGCTTGTGGAACTTGCTTTCAAATCAAATGT  3112911

Query  321      TCGAAATC-ACCGCATTGTTACTCT---GGAAAATCAACAGTGGTCACAGCCACCAATCT  376
                 |  |||| |  || |||||||  |   |     |  ||   ||| || || ||||| ||
Sbjct  3112910  GCTCAATCCAAAGC-TTGTTACCGTAATGTTGCTTTCACGACGGTGACTGCAACCAACCT  3112852

Query  377      TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
                |||||| || ||||||    ||   ||  ||   || || |||||||| ||||| ||   
Sbjct  3112851  TTGCCCGCCAAATTGGGCTAAACCTTCGGACAACGGCGGATGGTGCAACCCTCCGAGGGT  3112792

Query  437      CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
                 || ||||| ||| | || ||||| || |||||  ||||  | |||| ||| || |||||
Sbjct  3112791  TCACTTCGACATGTCGAAGCCAGCGTTTATGAAGATCGCCAATTGGAAGGCTGGGATCAT  3112732

Query  497      CCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCA  556
                ||| || |  |||||| | || || |||   |  |  || ||  |  ||||   ||| ||
Sbjct  3112731  CCCTGTCGTGTACCGACGTGTCCCGTGCGGTAAAAAAGGCGGCCTTCGGTTCACATTACA  3112672

Query  557      AGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAA  616
                ||| |||   || |||||| |    | ||| |||||||| ||||||| ||| ||| |   
Sbjct  3112671  AGGAAATGGCTACTGGCTTTTGGCGTACGTGATGAACGTCGGTGGCGGCGGCGACGTGTC  3112612

Query  617      GAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGC  676
                | | |||   || ||||| |||   ||   |||||| |  |||||||| || ||||||||
Sbjct  3112611  GGGAATGTGGGTGAAAGGGAGCAAAACAGGTTGGATCAAAATGAGCCATAACTGGGGAGC  3112552

Query  677      CTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTA  736
                 || || ||||| |||||  || |   ||| |||||| | |||||  |  ||||||||||
Sbjct  3112551  TTCATATCAAGCATTTTCAACTTTGGTTGGCCAATCTTTGTCTTTTAGAATCACTTCTTA  3112492

Query  737      CACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGCGGTAA  796
                ||| |||   || ||||||   |||||||||||||||||  |||  |||||    |||  
Sbjct  3112491  CACAACCAAAGAGACCATCACAGCTTGGAACGTTGCTCCTTCTAGTTGGAGGTTTGGTTT  3112432

Query  797      GACTTACAA  805
                ||| |||||
Sbjct  3112431  GACCTACAA  3112423


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 34/39(87%) 1/39(2%) Plus/Plus
Query  942     ATGTATGTATAATGTATGTATGTATCTAATTGTGATATA  980
               ||||||||||| ||||||||||||| ||  ||| |||||
Sbjct  863590  ATGTATGTATA-TGTATGTATGTATGTATGTGTAATATA  863627


GenBankGraphics Next Previous Descriptions
Medicago truncatula chromosome 5 clone mth2-54e16, COMPLETE SEQUENCE
CU137658.11128502
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
152 bits(168) 9e-33() 229/319(72%) 15/319(4%) Plus/Minus
Query  193    AAACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCC  251
              |||| || || || |||||||| || |||||| | ||| | |  || ||||| || |   
Sbjct  30687  AAACTATAGGAGGAGCATGTGGATATGGAAACTTGTTTCAGAATGGTTACGGGACAGAT-  30629

Query  252    ACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAG  311
              |||| |||  ||||| |||||||||||||  ||||||| |  |||||   |||||| |||
Sbjct  30628  ACGGTGGCTTTAAGCTCGACATTGTTCAACAATGGTTATGCGTGCGGGACATGTTTCCAG  30569

Query  312    ATAACATGTTCGAAATCACC-GCATTGTTACTCTGGAAAA-------TCAACAGTGGTCA  363
              || | ||| |   |||||   |||| ||||   | ||||        ||| || || |||
Sbjct  30568  ATTAAATGCTACCAATCAAGTGCAT-GTTA---TAGAAATGTGGCCTTCACCACTG-TCA  30514

Query  364    CAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCA  423
              | |||||||||||||||||||||||||||| | ||  |||  |   |||||| ||||| |
Sbjct  30513  CTGCCACCAATCTTTGCCCTCCTAATTGGTCCAAACCCTCTGATAATGGTGGATGGTGTA  30454

Query  424    ATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGA  483
              | || ||  ||   ||||| || ||||| || || |||||||||||| | ||  | ||||
Sbjct  30453  ACCCACCACGAGTTCATTTTGACATGGCCAAGCCTGCTTTCATGAAAATTGCACAGTGGA  30394

Query  484    GGGCCGGTATCATCCCAGT  502
                || |||||| |||| ||
Sbjct  30393  AAGCTGGTATCGTCCCTGT  30375


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
125 bits(138) 1e-24() 194/277(70%) 0/277(0%) Plus/Minus
Query  513    AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
              || |||||||||||||| |  ||||| ||  | |||   |||||||| ||    || |||
Sbjct  30275  AGGGTGCCATGCCAAAGAAAGGGAGGGATTCGATTTTCTTTCCAAGGAAACGGGTACTGG  30216

Query  573    CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
              ||  |  | |  || |||||||| || || |  ||||| ||   |||||||   || |||
Sbjct  30215  CTATTGGTGTATGTGATGAACGTCGGAGGTGGAGGAGATATGTCGAGCATGATGGTGAAA  30156

Query  633    GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
              || ||| | ||    ||||| |  |||||||| || ||||| || || |||||||| |||
Sbjct  30155  GGAAGCAGAACAGGATGGATTAAGATGAGCCATAACTGGGGTGCTTCCTACCAAGCATTT  30096

Query  693    TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
               |  | ||   ||||||| |||| |||||| || | ||||| ||||||||    || || 
Sbjct  30095  GCAACACTAGGTGGTCAAGCTCTTTCTTTCAGGCTTACTTCATACACCACTAAGGAGACT  30036

Query  753    ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCG  789
              ||   ||| ||||| ||||||||  | || |||| ||
Sbjct  30035  ATTATTGCATGGAATGTTGCTCCTTCCAATTGGAACG  29999


GenBankGraphics Next Previous Descriptions
Cucumis melo genomic chromosome, chr_9
LN713263.1241075673
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
149 bits(164) 1e-31() 230/320(72%) 9/320(2%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGA-CTGTCCACGGCGGC  259
                 ||||| || |||||||| |||||| | |||| ||  || || ||| |||   || | |||
Sbjct  21805289  GGTGGAGCTTGTGGGTATGGAAACTTGTTTACCAATGGGTATGGAACTGAT-ACTGTGGC  21805347

Query  260       GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
                   ||||| ||||| |||||||  | || ||||  |||||    || ||||| || | |||
Sbjct  21805348  TTTAAGCTCGACACTGTTCAACAACGGCTACGCTTGCGGGGCTTGCTTTCAAATCAAATG  21805407

Query  320       TTCGAAATC-ACCGCATTGTTACTC---TG-GAAAATCAACAGTGGTCACAGCCACCAAT  374
                    | | || |  |||| | ||| |   || |  | ||| ||  | | ||||||||||| 
Sbjct  21805408  CGTGCAGTCGAAGGCAT-GCTACGCAAATGTGCCATTCACCACCG-TGACAGCCACCAAC  21805465

Query  375       CTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGA  434
                 || ||||| || || ||||  || ||||||||||| ||||| |||||||| || || |||
Sbjct  21805466  CTGTGCCCGCCAAACTGGTCGCAGGACTCCAACGCCGGTGGGTGGTGCAACCCACCAAGA  21805525

Query  435       ACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATC  494
                    || ||||| ||||||||||| || ||||||||  ||||||  |||| ||| || || 
Sbjct  21805526  GTTCACTTCGACATGGCTAAACCTGCCTTCATGAAGATCGCTTGGTGGAAGGCTGGAATT  21805585

Query  495       ATCCCAGTTGCATACCGAAG  514
                 ||||| |||   ||||| ||
Sbjct  21805586  ATCCCTGTTCAGTACCGCAG  21805605


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
86.0 bits(94) 1e-12() 174/253(69%) 4/253(1%) Plus/Plus
Query  555       CAAGGTAATTCTTATTGGCTTCTTATCTTC-GTCATGAACGTTGGTGGCGCCGGAGACAT  613
                 ||||| |||   |||||| || |||  ||  || ||||| || ||||| |  |||||  |
Sbjct  21806566  CAAGGAAATGGATATTGG-TTATTAGTTTATGTGATGAATGTAGGTGGAGGAGGAGATGT  21806624

Query  614       CAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGG  673
                   |    ||||| || ||||| |||   ||    |||||||  |||||||| || |||||
Sbjct  21806625  ATATTCAATGGCAGTGAAAGGAAGCAAAACAGGATGGATAACAATGAGCCATAACTGGGG  21806684

Query  674       AGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTC  733
                 ||| || || ||||||||| | ||  |   ||| ||||| || || ||| |  |||||||
Sbjct  21806685  AGCTTCATATCAAGCTTTTGCTTCATTGGGTGGCCAATCACTTTCATTCAGAATCACTTC  21806744

Query  734       TTACACCACCGGTGAAACCATCTATGCT-TGGAACGTTGCTCCGGCTAACTGGAGCGGCG  792
                 |||||| ||  | |||| ||  ||  || ||||| |||  |||  | || ||| | |  |
Sbjct  21806745  TTACACAACTAGAGAAA-CACTTACTCTATGGAATGTTCTTCCTTCAAATTGGCGAGTTG  21806803

Query  793       GTAAGACTTACAA  805
                 |   |||||||||
Sbjct  21806804  GGTTGACTTACAA  21806816


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 46/56(82%) 3/56(5%) Plus/Plus
Query  926      TATGTTATACATCTACATGTATGTATAATGTATGTATGTATCTAATTGTG-ATATA  980
                ||||| ||| || |  ||||||||||| ||||||||||||| ||  |||| |||||
Sbjct  2037357  TATGT-ATATATATGTATGTATGTATA-TGTATGTATGTATATATATGTGTATATA  2037410


GenBankGraphics Next Previous Descriptions
Cucumis melo genomic scaffold, anchoredscaffold00005
LN681895.187663702
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
149 bits(164) 1e-31() 230/320(72%) 9/320(2%) Plus/Plus
Query  201      GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGA-CTGTCCACGGCGGC  259
                ||||| || |||||||| |||||| | |||| ||  || || ||| |||   || | |||
Sbjct  6464092  GGTGGAGCTTGTGGGTATGGAAACTTGTTTACCAATGGGTATGGAACTGAT-ACTGTGGC  6464150

Query  260      GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
                  ||||| ||||| |||||||  | || ||||  |||||    || ||||| || | |||
Sbjct  6464151  TTTAAGCTCGACACTGTTCAACAACGGCTACGCTTGCGGGGCTTGCTTTCAAATCAAATG  6464210

Query  320      TTCGAAATC-ACCGCATTGTTACTC---TG-GAAAATCAACAGTGGTCACAGCCACCAAT  374
                   | | || |  |||| | ||| |   || |  | ||| ||  | | ||||||||||| 
Sbjct  6464211  CGTGCAGTCGAAGGCAT-GCTACGCAAATGTGCCATTCACCACCG-TGACAGCCACCAAC  6464268

Query  375      CTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGA  434
                || ||||| || || ||||  || ||||||||||| ||||| |||||||| || || |||
Sbjct  6464269  CTGTGCCCGCCAAACTGGTCGCAGGACTCCAACGCCGGTGGGTGGTGCAACCCACCAAGA  6464328

Query  435      ACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATC  494
                   || ||||| ||||||||||| || ||||||||  ||||||  |||| ||| || || 
Sbjct  6464329  GTTCACTTCGACATGGCTAAACCTGCCTTCATGAAGATCGCTTGGTGGAAGGCTGGAATT  6464388

Query  495      ATCCCAGTTGCATACCGAAG  514
                ||||| |||   ||||| ||
Sbjct  6464389  ATCCCTGTTCAGTACCGCAG  6464408


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
86.0 bits(94) 1e-12() 174/253(69%) 4/253(1%) Plus/Plus
Query  555      CAAGGTAATTCTTATTGGCTTCTTATCTTC-GTCATGAACGTTGGTGGCGCCGGAGACAT  613
                ||||| |||   |||||| || |||  ||  || ||||| || ||||| |  |||||  |
Sbjct  6465369  CAAGGAAATGGATATTGG-TTATTAGTTTATGTGATGAATGTAGGTGGAGGAGGAGATGT  6465427

Query  614      CAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGG  673
                  |    ||||| || ||||| |||   ||    |||||||  |||||||| || |||||
Sbjct  6465428  ATATTCAATGGCAGTGAAAGGAAGCAAAACAGGATGGATAACAATGAGCCATAACTGGGG  6465487

Query  674      AGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTC  733
                ||| || || ||||||||| | ||  |   ||| ||||| || || ||| |  |||||||
Sbjct  6465488  AGCTTCATATCAAGCTTTTGCTTCATTGGGTGGCCAATCACTTTCATTCAGAATCACTTC  6465547

Query  734      TTACACCACCGGTGAAACCATCTATGCT-TGGAACGTTGCTCCGGCTAACTGGAGCGGCG  792
                |||||| ||  | |||| ||  ||  || ||||| |||  |||  | || ||| | |  |
Sbjct  6465548  TTACACAACTAGAGAAA-CACTTACTCTATGGAATGTTCTTCCTTCAAATTGGCGAGTTG  6465606

Query  793      GTAAGACTTACAA  805
                |   |||||||||
Sbjct  6465607  GGTTGACTTACAA  6465619


GenBankGraphics Next Previous Descriptions
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari
AP015034.1671157958
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
134 bits(148) 2e-27() 196/277(71%) 0/277(0%) Plus/Plus
Query  513       AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
                 |||||| | |||   |||||||| ||  || | ||    |||||||| |||  |||||||
Sbjct  52642913  AGAGTGGCTTGCGTGAGGAGTGGGGGATTGCGATTCTCTTTCCAAGGAAATGGTTATTGG  52642972

Query  573       CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAA  632
                  | ||  | |  || ||||| || || || |  ||||||||    | ||||   || |||
Sbjct  52642973  TTACTGGTGTATGTGATGAATGTGGGAGGAGGAGGAGACATTGCAAACATGTGGGTGAAA  52643032

Query  633       GGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTT  692
                 || ||  | ||    ||||| | ||||||||||||||||||||| ||||||||||| |||
Sbjct  52643033  GGAAGTGGAACTGGGTGGATCACCATGAGCCACAATTGGGGAGCTTCTTACCAAGCATTT  52643092

Query  693       TCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACC  752
                  |  |  |   ||| |||||||| || ||   ||  |||||||||||||||   || |||
Sbjct  52643093  GCAACATTGACTGGCCAATCTCTTTCGTTTAAGGCAACTTCTTACACCACCAAAGAGACC  52643152

Query  753       ATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCG  789
                 ||    |||||||| ||||||||  | |||||| |||
Sbjct  52643153  ATAATAGCTTGGAATGTTGCTCCCACCAACTGGGGCG  52643189


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
77.0 bits(84) 6e-10() 110/155(71%) 0/155(0%) Plus/Plus
Query  360       GTCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGG  419
                 || || ||||||||| | |||||||||||||||  | | | |||  |    || || |||
Sbjct  52642680  GTGACTGCCACCAATATCTGCCCTCCTAATTGGGCCGAGGCCTCTGATAACGGAGGGTGG  52642739

Query  420       TGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTAC  479
                 ||||| || ||  |  | ||||| || ||| | || || |||||||||||| | ||  | 
Sbjct  52642740  TGCAACCCACCACGTGCACATTTTGACATGTCCAAGCCCGCTTTCATGAAAATTGCACAG  52642799

Query  480       TGGAGGGCCGGTATCATCCCAGTTGCATACCGAAG  514
                 ||||  || || ||| | || |||   ||||||||
Sbjct  52642800  TGGAAAGCTGGAATCGTTCCTGTTATGTACCGAAG  52642834


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
60.8 bits(66) 4e-05() 163/242(67%) 22/242(9%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGC---GGCTACGGACTGTCCACGGCG  257
                 ||||| ||||||||||| |||||||| |   |||||   ||||| |||     ||| || 
Sbjct  28613196  GGTGGAGCATGTGGGTATGGAAACCTCT---ACAGCCAAGGCTATGGAACAAACACTGCT  28613252

Query  258       GCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACA  317
                 ||  | |||||  |  |||||||  |||| |   | || |||   || ||| |||| |  
Sbjct  28613253  GCTTTGAGCACTGCGCTGTTCAACAATGGGTTAAGCTGTGGCTCTTGCTTTGAGATTAGG  28613312

Query  318       TGTTCGAAATCACCGCA--TTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAA  373
                 ||| | |||| ||| ||  | ||  ||  ||||   ||| |   ||||||| ||||||||
Sbjct  28613313  TGTGC-AAATGACCACAAGTGGTGCCTTCCTGG---ATCGATTTTGGTCACTGCCACCAA  28613368

Query  374       TCTTTGCCCTCCTA--ATTG--GTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTC  429
                 | | || || || |  | ||   ||||||     ||| |||||||| ||||| || ||||
Sbjct  28613369  TTTCTGTCCACCAAACAATGCCTTACCAA----ACAATGCTGGTGGCTGGTGTAACCCTC  28613424

Query  430       CT  431
                 ||
Sbjct  28613425  CT  28613426


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 35/40(88%) 1/40(2%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                 |||| || || ||||||||||| |||||||||||||| ||
Sbjct  38365335  TATATATATATATGTATGTATATATGTATGTATGTATATA  38365374


Alignment statistics for match #5
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 41/50(82%) 5/50(10%) Plus/Minus
Query  931       TATACATCTACATGTATGTATA---ATGTATGTATGTATCTAATTGTGAT  977
                 |||| || || |||||||||||   |||||||||||||||  |||| |||
Sbjct  41161538  TATATATATATATGTATGTATATGTATGTATGTATGTATC--ATTGGGAT  41161491


Alignment statistics for match #6
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 38/44(86%) 2/44(4%) Plus/Plus
Query  926       TATGTTATACATCTACATGTATGTATAATGTATGTATGTATCTA  969
                 ||||| ||| || || |||||||||| |||||||||||||| ||
Sbjct  52372754  TATGT-ATATATGTATATGTATGTAT-ATGTATGTATGTATATA  52372795


Alignment statistics for match #7
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 35/41(85%) 1/41(2%) Plus/Minus
Query  931      TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAA  970
                ||||||| |||||  ||| ||| |||||||||||||| |||
Sbjct  5102820  TATACATATACATACATGCATATATGTATGTATGTATGTAA  5102780


Alignment statistics for match #8
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 39/46(85%) 2/46(4%) Plus/Minus
Query  926       TATGT-TATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                 ||||| |||| || || ||||||||||| |||||||||| ||| ||
Sbjct  39157138  TATGTATATAGATATATATGTATGTATATATGTATGTATATATGTA  39157093


GenBankGraphics Next Previous Descriptions
Lotus japonicus genomic DNA, chromosome 2, clone: LjB10A07, BM1477b
AP009544.1642363
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
134 bits(148) 2e-27() 187/260(72%) 4/260(1%) Plus/Minus
Query  513    AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
              |||||||| |||||||| |  |||||  |  | ||    |||||||| ||   |||||||
Sbjct  24840  AGAGTGCCGTGCCAAAGTAAGGGAGGGGTTCGATTCTCGTTCCAAGGAAACGGTTATTGG  24781

Query  573    CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACAT--CAAGAGCATGGCCGTTA  630
              ||  |  | |  || |||||||| || || |  ||||||||  |||||   |||  || |
Sbjct  24780  CTATTGGTGTATGTGATGAACGTGGGCGGTGGAGGAGACATTTCAAGAATGTGG--GTGA  24723

Query  631    AAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTT  690
              |||| ||| | ||    ||||| ||||||||||| |||||||| || || |||||||| |
Sbjct  24722  AAGGAAGCAGAACAGGATGGATTAGCATGAGCCATAATTGGGGTGCTTCGTACCAAGCAT  24663

Query  691    TTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAA  750
              || |  | ||    || ||| |||| |||||   | ||||||| ||||||||||| || |
Sbjct  24662  TTGCAACACTGGGGGGCCAAGCTCTTTCTTTTAAGATCACTTCGTACACCACCGGAGAGA  24603

Query  751    CCATCTATGCTTGGAACGTT  770
              | || ||||| ||||| |||
Sbjct  24602  CTATTTATGCATGGAATGTT  24583


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 217/312(70%) 17/312(5%) Plus/Minus
Query  201    GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGC  259
              || || |||||||||||||| ||  | ||| | ||||| ||||| || |   || | |||
Sbjct  25281  GGAGGAGCATGTGGGTACGGGAATTTGTTTCAGAGCGGTTACGGGACAGAT-ACAGTGGC  25223

Query  260    GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
                ||||| ||||  | || ||  ||||||| |  || ||    ||||  ||||||| |||
Sbjct  25222  TTTAAGCTCGACGCTATTTAACAATGGTTATGCGTGTGGGACTTGTTACCAGATAAAATG  25163

Query  320    TTCGAAATCACCGCATTGT-TACTCTGGAAAA-------TCAACAGTGGTCACAGCCACC  371
              ||   | ||    || ||  | || |  |||        ||| || || |||| ||||||
Sbjct  25162  TTACCAGTC----CAGTGCATGCTATAAAAACGTGGCCTTCACCACTG-TCACCGCCACC  25108

Query  372    AATCTTTGCCCTCCTAATTGGTACCAAG-ACTCCAACGCTGGTGGTTGGTGCAATCCTCC  430
              ||||| |||||||||||||||| |||||  |||  |    || || |||||||| |||||
Sbjct  25107  AATCTCTGCCCTCCTAATTGGT-CCAAGCCCTCAGATAACGGCGGCTGGTGCAACCCTCC  25049

Query  431    TAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGG  490
                || | |||||||| ||| | || || || ||||||||| ||||| | ||||  |||||
Sbjct  25048  CCGAGCGCATTTCGACATGTCCAAGCCCGCCTTCATGAAAATCGCTCAGTGGAAAGCCGG  24989

Query  491    TATCATCCCAGT  502
               ||  |||| ||
Sbjct  24988  CATTGTCCCTGT  24977


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 39/49(80%) 0/49(0%) Plus/Minus
Query  155    TGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGT  203
              |||||| || || || || ||||| ||||| | |  |||||||||||||
Sbjct  25458  TGCTCATGCTACCTTTTATGGTGATGAGACTGCTTCTGAAACCATGGGT  25410


GenBankGraphics Next Previous Descriptions
Solanum lycopersicum chromosome ch08, complete genome
HG975520.16303583012
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
123 bits(136) 4e-24() 209/302(69%) 3/302(0%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                 ||||| || ||||| || |||||| | |||||    || || |||    | || || || 
Sbjct  60566279  GGTGGGGCTTGTGGATATGGAAACTTGTTTAATTCAGGTTATGGAACAGCAACAGCAGCA  60566338

Query  261       CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                  |||||||   ||| ||     |||| ||   ||| || ||||||||||| ||||  |||
Sbjct  60566339  TTAAGCACAGTATTATTTGGCAATGGATATTCATGTGGTCAATGTTTTCAAATAATGTGT  60566398

Query  321       TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
                    ||||||     ||| ||  | ||     | ||| |    |||||||| || ||||| 
Sbjct  60566399  GTAAAATCAAAATTTTGCTATACAGGGTTCACCACAATT---ACAGCCACAAACCTTTGT  60566455

Query  381       CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
                 || |||||||||| |||||| || |||  |||||| |||||||| || ||  |    |||
Sbjct  60566456  CCACCTAATTGGTCCCAAGATTCAAACCATGGTGGATGGTGCAACCCACCACGCCAACAT  60566515

Query  441       TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
                 ||||| ||| | ||||| |||||||||||| | ||  | |||| ||| |||||  |||||
Sbjct  60566516  TTCGACATGTCAAAACCTGCTTTCATGAAAATTGCCCAATGGAAGGCTGGTATTGTCCCA  60566575

Query  501       GT  502
                 ||
Sbjct  60566576  GT  60566577


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
120 bits(132) 5e-23() 160/222(72%) 3/222(1%) Plus/Plus
Query  293      ATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATC  352
                ||| || |||||||| || |||| ||||  | | |||     ||| |||||   ||    
Sbjct  2293450  ATGTGGACAATGTTTCCAAATAAAATGTGTGCAGTCAGATTCTTGCTACTCAACAATTGT  2293509

Query  353      AACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGG  412
                |||||||   ||||| || |||||||| || || |||      |||||    |||  |||
Sbjct  2293510  AACAGTG---ACAGCAACAAATCTTTGTCCACCAAATCCTGCACAAGATAGTAACAATGG  2293566

Query  413      TGGTTGGTGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACT  472
                ||||||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||| |
Sbjct  2293567  TGGTTGGTGTAATCCACCTAGAACACATTTTGATATGGCTAAACCTGCTTTTATGAAAAT  2293626

Query  473      CGCTTACTGGAGGGCCGGTATCATCCCAGTTGCATACCGAAG  514
                 ||| | |||| ||| || ||  |||| ||| | ||  ||||
Sbjct  2293627  TGCTCAATGGAAGGCTGGAATTGTCCCTGTTTCTTATAGAAG  2293668


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
89.7 bits(98) 9e-14() 132/187(71%) 0/187(0%) Plus/Plus
Query  553       TCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACA  612
                 ||||||| ||   ||| ||| |  |  | | ||| |||||||| |  || | ||| ||| 
Sbjct  60566842  TCCAAGGAAACGGTTACTGGTTATTGGTATACGTGATGAACGTGGCGGGAGGCGGTGACG  60566901

Query  613       TCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGG  672
                 |    ||||||   || ||||| |||   ||    ||||| |||||||||||||||||||
Sbjct  60566902  TGGCAAGCATGTTGGTGAAAGGAAGCAAAACAGGATGGATGAGCATGAGCCACAATTGGG  60566961

Query  673       GAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTT  732
                 |||| || || ||||| ||| |  | || |  || ||| ||||||| |||  | ||||||
Sbjct  60566962  GAGCATCATATCAAGCATTTGCAACACTTTCAGGCCAAACTCTCTCATTCAAGCTCACTT  60567021

Query  733       CTTACAC  739
                 | |||||
Sbjct  60567022  CATACAC  60567028


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
69.8 bits(76) 9e-08() 132/192(69%) 2/192(1%) Plus/Plus
Query  585      GTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACG  644
                || ||||| ||||||||    ||||| ||    || |||   || || || ||    || 
Sbjct  2294374  GTGATGAATGTTGGTGGAAGTGGAGATATTGCAAGTATGTGGGTGAAGGGAAGTAAAACA  2294433

Query  645      AATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTAT  704
                | |||| ||   |||||||| ||||||||||| || || ||||| ||| |  ||||   |
Sbjct  2294434  AGTTGGTTAGCTATGAGCCATAATTGGGGAGCTTCATATCAAGCATTTGCAACTCTAAGT  2294493

Query  705      GGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACCATCTAT-GCTTG  763
                || ||| | || |||||   | |||||||||||||  |   |||||| || ||| |||  
Sbjct  2294494  GGACAAACACTTTCTTTTAAGATCACTTCTTACACATCTCATGAAACAAT-TATAGCTAC  2294552

Query  764      GAACGTTGCTCC  775
                 || ||||| ||
Sbjct  2294553  TAATGTTGCACC  2294564


Alignment statistics for match #5
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 39/46(85%) 2/46(4%) Plus/Minus
Query  926      TATGT-TATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                ||||| ||||  | || ||||||||||| |||||||||||||| ||
Sbjct  4827713  TATGTATATATGTATATATGTATGTATATATGTATGTATGTATGTA  4827668


Alignment statistics for match #6
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 48/61(79%) 2/61(3%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAAT-TGTGATATAACTCTTCT  988
                 |||| || || ||||||||||  ||||||||||||||  ||| ||||  ||||  ||| |
Sbjct  13601834  TATATATATATATGTATGTATGTATGTATGTATGTATAAAATATGTGCCATAATACTTTT  13601893

Query  989       T  989
                 |
Sbjct  13601894  T  13601894


Alignment statistics for match #7
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 39/46(85%) 2/46(4%) Plus/Plus
Query  926       TATGT-TATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                 ||||| |||| || || |||||| |||| |||||||||||||| ||
Sbjct  15633051  TATGTATATATATATATATGTATATATATATGTATGTATGTATATA  15633096


Alignment statistics for match #8
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 36/41(88%) 2/41(4%) Plus/Plus
Query  942       ATGTATGTATA-ATGTATGTATGTATCTAATTGTGATATAA  981
                 ||||||||||| |||||||||||||| | ||  ||||||||
Sbjct  22625245  ATGTATGTATATATGTATGTATGTATGT-ATATTGATATAA  22625284


Alignment statistics for match #9
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 38/45(84%) 3/45(6%) Plus/Minus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGT  974
                 |||||||  |||| ||| |||| |||||||||||||| || ||||
Sbjct  33922787  TATACAT--ACATATATATATATATGTATGTATGTATATATTTGT  33922745


GenBankGraphics Next Match Previous Match First Match
Alignment statistics for match #10
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 35/41(85%) 1/41(2%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAA  970
                 |||| || || | ||||||||  ||||||||||||||||||
Sbjct  41240859  TATATATATATAAGTATGTATGTATGTATGTATGTATCTAA  41240899


GenBankGraphics Next Match Previous Match First Match
Alignment statistics for match #11
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 35/41(85%) 1/41(2%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAA  970
                 |||| || || ||||||||||  |||||||||||||| |||
Sbjct  48390511  TATATATATATATGTATGTATGTATGTATGTATGTATATAA  48390551


GenBankGraphics Next Match Previous Match First Match
Alignment statistics for match #12
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 41/48(85%) 3/48(6%) Plus/Plus
Query  943       TGTATGTATA-ATGTATGTATGTATCTAATTGTGATATAA-CTCTTCT  988
                 |||||||||  |||||||||||||| || |||| |||||| || ||||
Sbjct  62388015  TGTATGTATGTATGTATGTATGTATGTATTTGT-ATATAATCTTTTCT  62388061


GenBankGraphics Next Previous Descriptions
Solanum lycopersicum strain Heinz 1706 chromosome 8 clone hba-6a9 map 8, complete sequence
AC244195.11005392
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
123 bits(136) 4e-24() 209/302(69%) 3/302(0%) Plus/Plus
Query  201    GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
              ||||| || ||||| || |||||| | |||||    || || |||    | || || || 
Sbjct  58103  GGTGGGGCTTGTGGATATGGAAACTTGTTTAATTCAGGTTATGGAACAGCAACAGCAGCA  58162

Query  261    CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
               |||||||   ||| ||     |||| ||   ||| || ||||||||||| ||||  |||
Sbjct  58163  TTAAGCACAGTATTATTTGGCAATGGATATTCATGTGGTCAATGTTTTCAAATAATGTGT  58222

Query  321    TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
                 ||||||     ||| ||  | ||     | ||| |    |||||||| || ||||| 
Sbjct  58223  GTAAAATCAAAATTTTGCTATACAGGGTTCACCACAATT---ACAGCCACAAACCTTTGT  58279

Query  381    CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
              || |||||||||| |||||| || |||  |||||| |||||||| || ||  |    |||
Sbjct  58280  CCACCTAATTGGTCCCAAGATTCAAACCATGGTGGATGGTGCAACCCACCACGCCAACAT  58339

Query  441    TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
              ||||| ||| | ||||| |||||||||||| | ||  | |||| ||| |||||  |||||
Sbjct  58340  TTCGACATGTCAAAACCTGCTTTCATGAAAATTGCCCAATGGAAGGCTGGTATTGTCCCA  58399

Query  501    GT  502
              ||
Sbjct  58400  GT  58401


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
89.7 bits(98) 9e-14() 132/187(71%) 0/187(0%) Plus/Plus
Query  553    TCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACA  612
              ||||||| ||   ||| ||| |  |  | | ||| |||||||| |  || | ||| ||| 
Sbjct  58665  TCCAAGGAAACGGTTACTGGTTATTGGTATACGTGATGAACGTGGCGGGAGGCGGTGACG  58724

Query  613    TCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGG  672
              |    ||||||   || ||||| |||   ||    ||||| |||||||||||||||||||
Sbjct  58725  TGGCAAGCATGTTGGTGAAAGGAAGCAAAACAGGATGGATGAGCATGAGCCACAATTGGG  58784

Query  673    GAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTT  732
              |||| || || ||||| ||| |  | || |  || ||| ||||||| |||  | ||||||
Sbjct  58785  GAGCATCATATCAAGCATTTGCAACACTTTCAGGCCAAACTCTCTCATTCAAGCTCACTT  58844

Query  733    CTTACAC  739
              | |||||
Sbjct  58845  CATACAC  58851


GenBankGraphics Next Previous Descriptions
Impatiens balsamina expansin gene, complete sequence
DQ899786.117612
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
123 bits(136) 4e-24() 213/306(70%) 5/306(1%) Plus/Plus
Query  201   GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTA-CGGACTGTCCACGGCGGC  259
             ||||| || || ||||||||||| || | || || ||| ||  ||||  |  || |||||
Sbjct  1212  GGTGGGGCTTGCGGGTACGGAAATCTATATAGCACCGGTTATGGGACCAT-GACCGCGGC  1270

Query  260   GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
              || ||||||  | | |||||  ||||||| |  |||||  | ||||||||||| |  ||
Sbjct  1271  TCTTAGCACGGTACTTTTCAAGAATGGTTATGCTTGCGGGGAGTGTTTTCAGATGAAGTG  1330

Query  320   TTCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTC---ACAGCCACCAATCT  376
             | |  ||||      ||| ||  | ||  |  |  |  || ||   || |||||||||||
Sbjct  1331  TACCCAATCGAAATCTTGCTATCCGGGTTATCCTTCCATGATCATAACCGCCACCAATCT  1390

Query  377   TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
             |||||| ||||||||| || | || |||||   ||| || ||||| || || ||  ||||
Sbjct  1391  TTGCCCGCCTAATTGGAACGAGGATTCCAATAATGGGGGATGGTGTAACCCGCCCCGAAC  1450

Query  437   CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
              || ||  |  |  | ||||| |||||||||||  | ||  | |||| |||||||||| |
Sbjct  1451  TCACTTTAACCTATCCAAACCCGCTTTCATGAAGATAGCACAGTGGAAGGCCGGTATCGT  1510

Query  497   CCCAGT  502
             ||| ||
Sbjct  1511  CCCTGT  1516


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
55.4 bits(60) 0.002() 71/98(72%) 0/98(0%) Plus/Plus
Query  513   AGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATTGG  572
             || ||||| |||   ||||  || || ||  |||| ||||||||||| ||    ||||||
Sbjct  1618  AGGGTGCCTTGCGTTAGGAAAGGGGGGATTCGGTTCCAATTCCAAGGGAACGGGTATTGG  1677

Query  573   CTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGA  610
             ||| |  | | ||| ||||| || ||||| ||||| ||
Sbjct  1678  CTTTTGGTTTACGTGATGAATGTGGGTGGAGCCGGGGA  1715


GenBankGraphics Next Previous Descriptions
Theobroma cacao genome assembly, chromosome: III
LT594790.1363642945
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
122 bits(134) 2e-23() 120/155(77%) 0/155(0%) Plus/Plus
Query  360       GTCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGG  419
                 || || || ||||| ||||||||||| | ||||  |||||||||||||  |||||| |||
Sbjct  33531521  GTAACTGCTACCAACCTTTGCCCTCCAAGTTGGGCCCAAGACTCCAACAATGGTGGCTGG  33531580

Query  420       TGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTAC  479
                 ||||| |||||| || |||| || || ||| | || || |||||||||||| | ||| | 
Sbjct  33531581  TGCAACCCTCCTCGAGCCCACTTTGACATGTCCAAGCCCGCTTTCATGAAAATTGCTCAG  33531640

Query  480       TGGAGGGCCGGTATCATCCCAGTTGCATACCGAAG  514
                 |||| ||| || ||  |||| ||    ||||||||
Sbjct  33531641  TGGAAGGCTGGCATTGTCCCTGTCATGTACCGAAG  33531675


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 178/253(70%) 0/253(0%) Plus/Plus
Query  552       TTCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGAC  611
                 |||||||| |||   || ||| |  |  | |  || ||||| || || || |  || |||
Sbjct  33531970  TTCCAAGGAAATGGGTACTGGTTGTTGGTGTATGTGATGAATGTAGGAGGAGGTGGTGAC  33532029

Query  612       ATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGG  671
                 ||  | | ||||   |||||||| ||| | ||    ||||| ||||||||||| || |||
Sbjct  33532030  ATTCAAAACATGTGGGTTAAAGGAAGCAGAACAGGGTGGATCAGCATGAGCCATAACTGG  33532089

Query  672       GGAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACT  731
                 ||||| || ||||| || ||| |  |||||   || |||||||| || |||  | |||||
Sbjct  33532090  GGAGCATCATACCAGGCATTTGCAACTCTCGGAGGCCAATCTCTTTCCTTCAAGCTCACT  33532149

Query  732       TCTTACACCACCGGTGAAACCATCTATGCTTGGAACGTTGCTCCGGCTAACTGGAGCGGC  791
                 || ||||| |||   || ||||||   |||||||| ||||| || || || ||||  |  
Sbjct  33532150  TCATACACAACCAAGGAGACCATCATAGCTTGGAATGTTGCACCTGCAAATTGGAATGTA  33532209

Query  792       GGTAAGACTTACA  804
                 ||   ||||||||
Sbjct  33532210  GGATTGACTTACA  33532222


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
48.2 bits(52) 0.28() 63/81(78%) 5/81(6%) Plus/Minus
Query  922       GCTTTATGTTATACATCTACATGTATGTATA-ATGTATGTATGTATCTA-ATTGTGATAT  979
                 ||||||| | ||  || | |||| ||| ||  |||||||||||||| || |||||||| |
Sbjct  32224039  GCTTTATAT-ATGTATATGCATGCATGCATGCATGTATGTATGTATGTATATTGTGATGT  32223981

Query  980       -AACTCTTCTTATAA-ATATC  998
                  ||||| |||  ||| |||||
Sbjct  32223980  GAACTCATCTGTTAATATATC  32223960


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 52/68(76%) 2/68(2%) Plus/Plus
Query  932       ATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGTGATA-TAACTCTTCTT  989
                 ||| || || || ||| |||| |||||||||||||| ||  || |||| |||  | ||||
Sbjct  26405177  ATATATATATATATATATATATATGTATGTATGTATGTATATGAGATATTAAAACATCTT  26405236

Query  990       ATAAATAT  997
                 | | ||||
Sbjct  26405237  ACATATAT  26405244


Alignment statistics for match #5
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 35/40(88%) 3/40(7%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTA  969
                 ||||||||  |||||||||||  |||||||||||||| ||
Sbjct  26609753  TATACATC--CATGTATGTATGTATGTATGTATGTATGTA  26609790


GenBankGraphics Next Previous Descriptions
Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari
AP015043.1288860403
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
120 bits(132) 5e-23() 152/209(73%) 0/209(0%) Plus/Plus
Query  585       GTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACG  644
                 || |||||||| || || |  ||||| ||   ||||||| | || | ||| ||| | |  
Sbjct  26065312  GTGATGAACGTGGGAGGTGGAGGAGATATTTCGAGCATGTCGGTGAGAGGAAGCAGAAGT  26065371

Query  645       AATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTAT  704
                    ||||| ||||||||||| || ||||| || || || ||||| ||| |  ||||   |
Sbjct  26065372  GGATGGATCAGCATGAGCCATAACTGGGGTGCTTCATATCAAGCATTTGCAACTCTTGCT  26065431

Query  705       GGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACCATCTATGCTTGG  764
                 || ||| |||| |||||| || | ||||| |||||||||   ||||| ||   ||| |||
Sbjct  26065432  GGCCAAGCTCTTTCTTTCAGGATTACTTCATACACCACCAAGGAAACTATAATTGCATGG  26065491

Query  765       AACGTTGCTCCGGCTAACTGGAGCGGCGG  793
                 || ||||||||  | ||||||| || |||
Sbjct  26065492  AATGTTGCTCCTTCAAACTGGAACGTCGG  26065520


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 218/318(69%) 5/318(1%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGC  259
                 || || ||||| |||||||| ||  | ||| | |  || ||||| || | | ||||||||
Sbjct  26064838  GGAGGAGCATGCGGGTACGGGAATTTATTTCAAAATGGTTACGGGACAGAC-ACGGCGGC  26064896

Query  260       GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
                  |||||  | || ||||||||  ||||||| |  || ||    |||| ||| ||||  ||
Sbjct  26064897  TCTAAGTTCTACGTTGTTCAACAATGGTTATGCGTGTGGAACTTGTTATCAAATAAAGTG  26064956

Query  320       TTCGAAATCAC---CGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCT  376
                 ||   |||||    ||  || | |    | |   |  ||   ||| || |||||||||||
Sbjct  26064957  TTACCAATCAAGTGCGTGTTATAAGAACGTAGCCTTTACGACGGTGACCGCCACCAATCT  26065016

Query  377       TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
                 |||||||||||| |||   |||  |||| |    || || |||||||| || ||  ||  
Sbjct  26065017  TTGCCCTCCTAACTGGGCGCAACCCTCCGATAACGGCGGCTGGTGCAACCCACCACGAGT  26065076

Query  437       CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
                  ||||| || ||||| ||||| |||||||||||  | ||  | ||||  ||||| ||| |
Sbjct  26065077  TCATTTTGACATGGCCAAACCCGCTTTCATGAAGATTGCGCAGTGGAAAGCCGGCATCGT  26065136

Query  497       CCCAGTTGCATACCGAAG  514
                 ||| |||   ||||| ||
Sbjct  26065137  CCCTGTTATGTACCGCAG  26065154


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 38/46(83%) 1/46(2%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGTG  975
                 |||| || || ||||||||||  |||||||||||||| ||  ||||
Sbjct  18989436  TATATATATATATGTATGTATGTATGTATGTATGTATATATGTGTG  18989481


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin A9 mRNA, complete cds
NM_120304.212491
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
120 bits(132) 5e-23() 266/391(68%) 10/391(2%) Plus/Plus
Query  141  GGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATG  200
            || || ||||   ||||||||||||| ||||||||||| |    || |   |  || |||
Sbjct  154  GGTCCTTGGATCAATGCTCACGCCACCTTCTACGGTGAAGCTGACGCTTCCGGCACTATG  213

Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            |||||||| ||||||||||| ||  | | || |   || |||||| ||  ||||||||| 
Sbjct  214  GGTGGTGCGTGTGGGTACGGGAATTTGTATAGCCAAGGTTACGGAGTGAACACGGCGGCT  273

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
             |||||||  | || |||||  ||||||   | || |||   || ||| || | |  |||
Sbjct  274  TTAAGCACTGCCTTATTCAACAATGGTTTGAGTTGTGGCTCTTGCTTTGAGCTTAAGTGT  333

Query  321  -TCGA-AATCACCGCATTGTTACT--CTGGAAA---ATCAACAGTGGTCACAGCCACCAA  373
             || |  ||| | | || ||  ||  |||||||   |||||   |  |||| ||||| ||
Sbjct  334  ATCAATGATC-CAGGATGGTGTCTTCCTGGAAACCCATCAATTCTTATCACCGCCACTAA  392

Query  374  TCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAG  433
            | | ||||||||||| |   | ||||    | ||  |||||||||||| ||||||||| |
Sbjct  393  TTTCTGCCCTCCTAACTTTAATCAAGCTAGCGACAATGGTGGTTGGTGTAATCCTCCTCG  452

Query  434  AACCCATTTCGATATGGCTAAACC-AGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTA  492
                || || ||| | ||||  || |  |||| |   | ||||| | |  | ||| ||||
Sbjct  453  TGAGCACTTTGATCTCGCTATGCCTATGTTTCTTTCCA-TCGCTAAGTATAAGGCTGGTA  511

Query  493  TCATCCCAGTTGCATACCGAAGAGTGCCATG  523
            || |||| ||  | ||||| ||  | |||||
Sbjct  512  TCGTCCCCGTCTCTTACCGCAGGATCCCATG  542


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin precursor-like protein (At5g02260; T1E22_20) mRNA, complete cds
AY064685.19051
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
120 bits(132) 5e-23() 266/391(68%) 10/391(2%) Plus/Plus
Query  141  GGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATG  200
            || || ||||   ||||||||||||| ||||||||||| |    || |   |  || |||
Sbjct  88   GGTCCTTGGATCAATGCTCACGCCACCTTCTACGGTGAAGCTGACGCTTCCGGCACTATG  147

Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            |||||||| ||||||||||| ||  | | || |   || |||||| ||  ||||||||| 
Sbjct  148  GGTGGTGCGTGTGGGTACGGGAATTTGTATAGCCAAGGTTACGGAGTGAACACGGCGGCT  207

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
             |||||||  | || |||||  ||||||   | || |||   || ||| || | |  |||
Sbjct  208  TTAAGCACTGCCTTATTCAACAATGGTTTGAGTTGTGGCTCTTGCTTTGAGCTTAAGTGT  267

Query  321  -TCGA-AATCACCGCATTGTTACT--CTGGAAA---ATCAACAGTGGTCACAGCCACCAA  373
             || |  ||| | | || ||  ||  |||||||   |||||   |  |||| ||||| ||
Sbjct  268  ATCAATGATC-CAGGATGGTGTCTTCCTGGAAACCCATCAATTCTTATCACCGCCACTAA  326

Query  374  TCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAG  433
            | | ||||||||||| |   | ||||    | ||  |||||||||||| ||||||||| |
Sbjct  327  TTTCTGCCCTCCTAACTTTAATCAAGCTAGCGACAATGGTGGTTGGTGTAATCCTCCTCG  386

Query  434  AACCCATTTCGATATGGCTAAACC-AGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTA  492
                || || ||| | ||||  || |  |||| |   | ||||| | |  | ||| ||||
Sbjct  387  TGAGCACTTTGATCTCGCTATGCCTATGTTTCTTTCCA-TCGCTAAGTATAAGGCTGGTA  445

Query  493  TCATCCCAGTTGCATACCGAAGAGTGCCATG  523
            || |||| ||  | ||||| ||  | |||||
Sbjct  446  TCGTCCCCGTCTCTTACCGCAGGATCCCATG  476


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin precursor-like protein (At5g02260; T1E22_20) mRNA, complete cds
AY054586.112051
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
120 bits(132) 5e-23() 266/391(68%) 10/391(2%) Plus/Plus
Query  141  GGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATG  200
            || || ||||   ||||||||||||| ||||||||||| |    || |   |  || |||
Sbjct  154  GGTCCTTGGATCAATGCTCACGCCACCTTCTACGGTGAAGCTGACGCTTCCGGCACTATG  213

Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            |||||||| ||||||||||| ||  | | || |   || |||||| ||  ||||||||| 
Sbjct  214  GGTGGTGCGTGTGGGTACGGGAATTTGTATAGCCAAGGTTACGGAGTGAACACGGCGGCT  273

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
             |||||||  | || |||||  ||||||   | || |||   || ||| || | |  |||
Sbjct  274  TTAAGCACTGCCTTATTCAACAATGGTTTGAGTTGTGGCTCTTGCTTTGAGCTTAAGTGT  333

Query  321  -TCGA-AATCACCGCATTGTTACT--CTGGAAA---ATCAACAGTGGTCACAGCCACCAA  373
             || |  ||| | | || ||  ||  |||||||   |||||   |  |||| ||||| ||
Sbjct  334  ATCAATGATC-CAGGATGGTGTCTTCCTGGAAACCCATCAATTCTTATCACCGCCACTAA  392

Query  374  TCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAG  433
            | | ||||||||||| |   | ||||    | ||  |||||||||||| ||||||||| |
Sbjct  393  TTTCTGCCCTCCTAACTTTAATCAAGCTAGCGACAATGGTGGTTGGTGTAATCCTCCTCG  452

Query  434  AACCCATTTCGATATGGCTAAACC-AGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTA  492
                || || ||| | ||||  || |  |||| |   | ||||| | |  | ||| ||||
Sbjct  453  TGAGCACTTTGATCTCGCTATGCCTATGTTTCTTTCCA-TCGCTAAGTATAAGGCTGGTA  511

Query  493  TCATCCCAGTTGCATACCGAAGAGTGCCATG  523
            || |||| ||  | ||||| ||  | |||||
Sbjct  512  TCGTCCCCGTCTCTTACCGCAGGATCCCATG  542


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin A1 mRNA, complete cds
NM_001198428.111471
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  197  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  256

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  257  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  316

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  317  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  375

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  376  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  432

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  433  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  487

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  488  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  546

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  547  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  589


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin A1 mRNA, complete cds
NM_179538.113221
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  286  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  345

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  346  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  405

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  406  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  464

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  465  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  521

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  522  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  576

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  577  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  635

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  636  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  678


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin A1 mRNA, complete cds
NM_105622.213961
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  286  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  345

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  346  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  405

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  406  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  464

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  465  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  521

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  522  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  576

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  577  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  635

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  636  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  678


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana expansin At-EXPA1 (At-EXPA1) mRNA, partial cds
U30476.17491
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  49   GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  108

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  109  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  168

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  169  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  227

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  228  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  284

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  285  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  339

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  340  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  398

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  399  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  441


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana putative expansin protein EXP1 (At1g69530) mRNA, complete cds
AY051047.17841
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  88   GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  147

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  148  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  207

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  208  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  266

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  267  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  323

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  324  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  378

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  379  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  437

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  438  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  480


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana putative expansin protein At-EXP1 (At1g69530) mRNA, complete cds
AF360291.113391
Gene-associated gene details
GEO Profiles-microarray expression data
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  195  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  254

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  255  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  314

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  315  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  373

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  374  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  430

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  431  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  485

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  486  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  544

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  545  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  587


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)
BX815362.111531
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  156  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  215

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  216  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  275

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  276  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  334

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  335  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  391

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  392  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  446

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  447  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  505

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  506  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  548


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)
BX815073.112871
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
118 bits(130) 2e-22() 274/403(68%) 20/403(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  179  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  238

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  239  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  298

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  299  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  357

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  358  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  414

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| || |  ||||| |||
Sbjct  415  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCAGCA-GCATTTTGAT  469

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  470  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  528

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTT  548
             |||||||||||||| |||   || || ||||| || ||||||
Sbjct  529  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAATAAGGTTT  571


GenBankGraphics Next Previous Descriptions
Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2150P13
AK372378.111211
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
116 bits(128) 7e-22() 354/544(65%) 16/544(2%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| |||||||| |||||| ||      || || ||||| || || || |||
Sbjct  160  GCCCACGCCACGTTCTACGGCGACGAGGCCACATCCGAGACGATGGGCGGGGCGTGCGGG  219

Query  216  TACGGAAACCTTTTTAACAGCGGC-TACGGACTGTCCACGGCGGCGCTAAGCACGACATT  274
            ||||  | |       || ||||  |||||   |  |||||||||||| ||| ||||  |
Sbjct  220  TACGACATC-------ACGGCGGGGTACGGCGCGGACACGGCGGCGCTGAGCTCGACGCT  272

Query  275  GTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCGCA  334
            |||| | || || ||||| |||||    || |  |||||    ||   |||| |  ||  
Sbjct  273  GTTCCAGGAGGGCTACGGGTGCGGGACGTGCTACCAGATCCGGTGCGTGAAAGCCGCGGC  332

Query  335  TTGTTACT----CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAATT  390
            ||| |||     || |    | | ||  ||| || || ||||| || ||||| || || |
Sbjct  333  TTGCTACAGGGGCTCGCCGGTGATCAC-GGTGACCGCGACCAACCTGTGCCCGCCCAACT  391

Query  391  GGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCATTTCGATATGG  450
            ||   || ||| |||||   || || |||||||| || ||  | ||||| |||||  | |
Sbjct  392  GGGCGCAGGACACCAACAACGGCGGCTGGTGCAACCCACCGCGCACCCACTTCGACCTCG  451

Query  451  CTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGCATACC  510
            | |  || || |||| |||  | ||  |||||   || || ||| | || ||    ||||
Sbjct  452  CCATCCCGGCCTTCAAGAAGATGGCCGACTGGCACGCGGGCATCGTTCCCGTCATGTACC  511

Query  511  GAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTATT  570
            | || ||||| |||    | |  || || ||  ||||    ||||| || ||  |  | |
Sbjct  512  GCAGGGTGCCGTGCATGCGCAAGGGCGGCATCCGGTTCGCGTTCCAGGGGAACCCGCACT  571

Query  571  GGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTA  630
            |||| ||  | | ||||| |||||| || |||||||| ||| ||  |   |||   || |
Sbjct  572  GGCTGCTGGTGTACGTCACGAACGTCGGCGGCGCCGGGGACGTCGGGGAGATGTGGGTGA  631

Query  631  AAGGTA---GCCGGACGAATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAG  687
            | || |   || | | |   ||| |  ||||||||||||| ||||| ||||| ||||| |
Sbjct  632  AGGGCAATGGCGGAATGGGGTGGCTGCGCATGAGCCACAACTGGGGCGCCTCGTACCAGG  691

Query  688  CTTT  691
            | ||
Sbjct  692  CGTT  695


GenBankGraphics Next Previous Descriptions
Brassica rapa expansin-A6 (EXPA6), mRNA
NM_001301970.17831

Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 330/497(66%) 28/497(5%) Plus/Plus
Query  195  ACCATGGGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGC---GGCTACGGACTGTCC  251
            |||||||| ||||| ||||||||||| |||   ||  |||||   ||||||||  ||  |
Sbjct  148  ACCATGGGAGGTGCGTGTGGGTACGGGAAC---TTGTACAGCCAAGGCTACGGTGTGAAC  204

Query  252  ACGGCGGCGCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAG  311
            |||||||| ||||||||| |  |||||||  | |||| | | |||||    |||||  ||
Sbjct  205  ACGGCGGCTCTAAGCACGGCTCTGTTCAACAACGGTTTCAGTTGCGGTGCTTGTTTCGAG  264

Query  312  ATAACATGTTCGAAATCACCGCATTGTT---ACTCTGGAA---AATCAACAGTGGTCACA  365
             | | |||  |||     ||  | || |   |||| || |     || |   | ||||| 
Sbjct  265  CTCAAATGCGCGAGTGATCCTAAGTGGTGCCACTCAGGTAGCCCTTCCATCTTCGTCACT  324

Query  366  GCCACCAATCTTTGCCCTCCTAA-TTGGTACCAAGACTCCA---ACGCTGGTGGTTGGTG  421
            || |||||  | |||||||| || || |  |    |  |||   ||  ||| || |||||
Sbjct  325  GCGACCAACTTCTGCCCTCCAAACTTCGCTC----AGCCCAGTGACAATGGCGGATGGTG  380

Query  422  CAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTG  481
            ||| ||||||||  |||| |||||| | ||||  ||    ||| | ||  ||||  | | 
Sbjct  381  CAACCCTCCTAGGCCCCACTTCGATCTCGCTATGCCTATGTTCCTCAAGATCGCCGAGTA  440

Query  482  GAGGGCCGGTATCATCCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTAT  541
              | ||||| ||  |||| ||  | | |||  |||||||||||| || ||| ||||| ||
Sbjct  441  TCGCGCCGGAATTGTCCCCGTCTCTTTCCGCCGAGTGCCATGCCGAAAGAGAGGAGGAAT  500

Query  542  GAGGTTTCAATTCCAAGGTAATTC--TTA--TTGGCTTCTTATCTTCGTCATGAACGTTG  597
            ||||||     || | |||  |||  |||  ||  |||  | || | ||||  ||||| |
Sbjct  501  GAGGTTCACGATCAACGGT--TTCCGTTACTTTAACTTGGT-TC-TGGTCACAAACGTCG  556

Query  598  GTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCA  657
              ||||||||| |||||    |  ||  ||| ||||| |   | |||   ||||| ||||
Sbjct  557  CCGGCGCCGGAAACATCGTACGGCTGAGCGTGAAAGGAACAAGAACGTCGTGGATGAGCA  616

Query  658  TGAGCCACAATTGGGGA  674
            ||||||  || ||||||
Sbjct  617  TGAGCCGAAACTGGGGA  633


GenBankGraphics Next Previous Descriptions
Zea mays expansin gene, complete sequence
DQ899789.117431
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 277/418(66%) 5/418(1%) Plus/Plus
Query  201   GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
             ||||| || ||||||||||| ||||| |     | ||| |||||   |  ||||||||||
Sbjct  1298  GGTGGGGCGTGTGGGTACGGCAACCTGTACGCGACCGGGTACGGCACGGACACGGCGGCG  1357

Query  261   CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
             || ||||||||  ||||||| || || ||||| |||||    || |  |||||    || 
Sbjct  1358  CTGAGCACGACGCTGTTCAAGGACGGGTACGGGTGCGGGACGTGCTACCAGATCCGGTGC  1417

Query  321   TCGAAATCACCGCATTGTTACT----CTGGAAAATCAACAGTGGTCACAGCCACCAATCT  376
              ||   || ||    || |||     || |    | | ||  ||| || |||||||| ||
Sbjct  1418  ACGGGCTCCCCCTGGTGCTACAGCGGCTCGCCGGTGATCAC-GGTGACGGCCACCAACCT  1476

Query  377   TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
              ||||| || || |||   || |||||||||   || || |||||||| || ||  | ||
Sbjct  1477  GTGCCCGCCCAACTGGGCGCAGGACTCCAACAACGGCGGGTGGTGCAACCCGCCCCGCAC  1536

Query  437   CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
             ||| |||||  |  | || || || |||||||   | ||  | ||| | || || ||| |
Sbjct  1537  CCACTTCGACCTCTCCAAGCCGGCGTTCATGAGGATGGCGCAGTGGCGCGCGGGCATCGT  1596

Query  497   CCCAGTTGCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCA  556
              || ||    |||||  | ||||| |||    |||| || ||  || ||||     ||||
Sbjct  1597  GCCCGTCATGTACCGCCGCGTGCCGTGCGTGCGGAGGGGCGGCCTGCGGTTCGCGCTCCA  1656

Query  557   AGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATC  614
              || ||  | || ||||| ||    | |||||||||||| || |||||||| ||| ||
Sbjct  1657  GGGGAACCCCTACTGGCTGCTGGCGTACGTCATGAACGTGGGCGGCGCCGGCGACGTC  1714


GenBankGraphics Next Previous Descriptions
Chelidonium majus expansin gene, complete sequence
DQ899787.17472
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 209/303(69%) 5/303(1%) Plus/Plus
Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGG-ACTGTCCACGGCGGC  259
            || || || |||||||| |||||| | |||   |  || || || || |   || |||||
Sbjct  147  GGAGGGGCTTGTGGGTATGGAAACTTGTTTTCTAATGGTTATGGGACAGAT-ACTGCGGC  205

Query  260  GCTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATG  319
              | ||||| ||| |||||||  |||| ||||  || ||    ||||  |  |||   ||
Sbjct  206  TTTGAGCACAACACTGTTCAACAATGGCTACGCTTGTGGAACTTGTTACCGAATACAGTG  265

Query  320  TTCGAAATCACCGCATTGTTACTCTGGAAAA---TCAACAGTGGTCACAGCCACCAATCT  376
            |    ||||   ||| || | | ||||       || ||  | || ||||| || ||  |
Sbjct  266  TGTTGAATCTAAGCACTGCTCCGCTGGCTCCCCTTCCACCATCGTGACAGCTACAAACAT  325

Query  377  TTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAAC  436
            |||||| || || ||||  ||||||||||| ||||||||||||||||| || || || ||
Sbjct  326  TTGCCCACCCAACTGGTCTCAAGACTCCAATGCTGGTGGTTGGTGCAACCCACCCAGGAC  385

Query  437  CCATTTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCAT  496
             ||||| || ||| |||| || ||||| |||||| ||||  | ||||  ||||| || ||
Sbjct  386  TCATTTTGACATGTCTAAGCCCGCTTTTATGAAAATCGCAGATTGGAAAGCCGGGATTAT  445

Query  497  CCC  499
             ||
Sbjct  446  TCC  448


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
59.0 bits(64) 2e-04() 114/168(68%) 3/168(1%) Plus/Plus
Query  509  CCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTTTCAATTCCAAGGTAATTCTTA  568
            ||| || ||  | ||| | |||| ||| ||  |  | |||   |||||||| |||   ||
Sbjct  579  CCGCAGGGTTGCTTGCAATAGGATTGGGGGACTTCGATTTAGTTTCCAAGGAAATGGATA  638

Query  569  TTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGT  628
            |||| |  |  | |  || |||||||| || || |  ||||||||    | ||||   ||
Sbjct  639  TTGGTTGTTGGTGTATGTAATGAACGTGGGAGGTGGTGGAGACATTGCCAACATGTGGGT  698

Query  629  TAAAGGTAGCCGGACGA---ATTGGATAAGCATGAGCCACAATTGGGG  673
             || || |||  ||  |   |||||||||||||||||||||| |||||
Sbjct  699  AAAGGGAAGCAAGAGTAGTGATTGGATAAGCATGAGCCACAACTGGGG  746


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana clone 21205 mRNA, complete sequence
AY086085.112301
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
114 bits(126) 2e-21() 265/391(68%) 10/391(2%) Plus/Plus
Query  141  GGCCCATGGAGATATGCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATG  200
            || || ||||   ||||||||||||| ||||||||||| |    || |   |  || |||
Sbjct  154  GGTCCTTGGATCAATGCTCACGCCACCTTCTACGGTGAAGCTGACGCTTCCGGCACTATG  213

Query  201  GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
            |||||||| ||||||||||| ||  | | || |   || |||||| ||  ||||||||| 
Sbjct  214  GGTGGTGCGTGTGGGTACGGGAATTTGTATAGCCAAGGTTACGGAGTGAACACGGCGGCT  273

Query  261  CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
             |||||||  | || |||||  ||||||   | || |||   || ||| || | |  |||
Sbjct  274  TTAAGCACTGCCTTATTCAACAATGGTTTGAGTTGTGGCTCTTGCTTTGAGCTTAAGTGT  333

Query  321  -TCGA-AATCACCGCATTGTTACT--CTGGAAA---ATCAACAGTGGTCACAGCCACCAA  373
             || |  ||| | | || ||  ||  |||||||   ||| |   |  |||| ||||| ||
Sbjct  334  ATCAATGATC-CAGGATGGTGTCTTCCTGGAAACCCATCTATCCTTATCACCGCCACTAA  392

Query  374  TCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAG  433
            | | ||||||||||| |   | ||||    | ||  |||||||||||| ||||||||| |
Sbjct  393  TTTCTGCCCTCCTAACTTTAATCAAGCTAGCGACAATGGTGGTTGGTGTAATCCTCCTCG  452

Query  434  AACCCATTTCGATATGGCTAAACC-AGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTA  492
                || || ||| | ||||  || |  |||| |   | ||||| | |  | ||| ||||
Sbjct  453  TGAGCACTTTGATCTCGCTATGCCTATGTTTCTTTCCA-TCGCTAAGTATAAGGCTGGTA  511

Query  493  TCATCCCAGTTGCATACCGAAGAGTGCCATG  523
            || |||| ||  | ||||| ||  | |||||
Sbjct  512  TCGTCCCCGTCTCTTACCGCAGGATCCCATG  542


GenBankGraphics Next Previous Descriptions
Solanum pennellii chromosome ch08, complete genome
HG975447.1705466597
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
111 bits(122) 3e-20() 158/222(71%) 3/222(1%) Plus/Plus
Query  293      ATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCGCATTGTTACTCTGGAAAATC  352
                ||| || |||||||| || |||| ||||  | | |||     ||| |||||   |     
Sbjct  2519793  ATGTGGACAATGTTTCCAAATAAAATGTGTGCAGTCAGATTCTTGCTACTCAACAGTTGT  2519852

Query  353      AACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAATTGGTACCAAGACTCCAACGCTGG  412
                 ||||||   ||||| || |||||||| || || |||      |||||    |||  |||
Sbjct  2519853  GACAGTG---ACAGCAACAAATCTTTGTCCACCAAATCCTGCACAAGATAGTAACAATGG  2519909

Query  413      TGGTTGGTGCAATCCTCCTAGAACCCATTTCGATATGGCTAAACCAGCTTTCATGAAACT  472
                ||||||||| ||||| |||||||| ||||| |||||||||||||| ||||| |||||| |
Sbjct  2519910  TGGTTGGTGTAATCCACCTAGAACACATTTTGATATGGCTAAACCTGCTTTTATGAAAAT  2519969

Query  473      CGCTTACTGGAGGGCCGGTATCATCCCAGTTGCATACCGAAG  514
                 ||| | |||| ||| || ||  |||| ||| | ||  ||||
Sbjct  2519970  TGCTCAATGGAAGGCTGGAATTGTCCCTGTTTCTTATAGAAG  2520011


Alignment statistics for match #2
ScoreExpectIdentitiesGapsStrandFrame
111 bits(122) 3e-20() 206/302(68%) 3/302(0%) Plus/Plus
Query  201       GGTGGTGCATGTGGGTACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCG  260
                 ||||| || ||||| || |||||| | |||||    || || |||    | || || || 
Sbjct  67930575  GGTGGGGCTTGTGGATATGGAAACTTGTTTAATTCAGGTTATGGAACAGCAACAGCAGCA  67930634

Query  261       CTAAGCACGACATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGT  320
                  |||||||   ||| ||     |||| ||   ||| || ||||||||||| ||||  |||
Sbjct  67930635  TTAAGCACAGTATTATTTGGCAATGGATATTCATGTGGTCAATGTTTTCAAATAATGTGT  67930694

Query  321       TCGAAATCACCGCATTGTTACTCTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGC  380
                    ||||||     ||| ||  | ||     | ||| |    |||||||| || ||||| 
Sbjct  67930695  GTAAAATCAAAATTTTGCTATACAGGGTTCACCACAATT---ACAGCCACAAACCTTTGT  67930751

Query  381       CCTCCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCAT  440
                 || |||||||||| |||||| || |||  |||||| |||||||| || ||  |    |||
Sbjct  67930752  CCACCTAATTGGTCCCAAGATTCAAACCATGGTGGATGGTGCAACCCACCACGCCAACAT  67930811

Query  441       TTCGATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCA  500
                 || || ||| | ||||| |||||||||||| | ||  | |||| ||| || ||  |||| 
Sbjct  67930812  TTTGACATGTCAAAACCTGCTTTCATGAAAATTGCCCAATGGAAGGCTGGCATTGTCCCC  67930871

Query  501       GT  502
                 ||
Sbjct  67930872  GT  67930873


Alignment statistics for match #3
ScoreExpectIdentitiesGapsStrandFrame
91.5 bits(100) 3e-14() 173/252(69%) 2/252(0%) Plus/Plus
Query  553       TCCAAGGTAATTCTTATTGGCTTCTTATCTTCGTCATGAACGTTGGTGGCGCCGGAGACA  612
                 ||||||| ||   ||| ||| |  |  | | ||| |||||||| |  || | ||| ||| 
Sbjct  67931135  TCCAAGGAAACGGTTACTGGTTATTGGTATACGTGATGAACGTGGCGGGAGGCGGTGACG  67931194

Query  613       TCAAGAGCATGGCCGTTAAAGGTAGCCGGACGAATTGGATAAGCATGAGCCACAATTGGG  672
                 |    ||||||   || ||||| |||   ||    ||||| |||||||||||||||||||
Sbjct  67931195  TGGCAAGCATGTGGGTGAAAGGAAGCAAAACAGGATGGATGAGCATGAGCCACAATTGGG  67931254

Query  673       GAGCCTCTTACCAAGCTTTTTCCTCTCTCTATGGTCAATCTCTCTCTTTCCGGGTCACTT  732
                 |||| || || ||||| ||| |  | || |  || ||| ||||||| |||  | ||||||
Sbjct  67931255  GAGCATCATATCAAGCATTTGCAACACTTTCAGGCCAAACTCTCTCATTCAAGCTCACTT  67931314

Query  733       CTTACACCACCGGTGAAACCATCTAT-GCTTGGAACGTTGCTCCGGCTAACTGGAGCGGC  791
                 | |||||  |   | | || || ||| | |   || ||||| ||  |||| ||| |||  
Sbjct  67931315  CATACACATCTCATCAGACAAT-TATAGTTAATAATGTTGCACCTTCTAATTGGCGCGTA  67931373

Query  792       GGTAAGACTTAC  803
                 || | |||||||
Sbjct  67931374  GGCATGACTTAC  67931385


Alignment statistics for match #4
ScoreExpectIdentitiesGapsStrandFrame
69.8 bits(76) 9e-08() 132/192(69%) 2/192(1%) Plus/Plus
Query  585      GTCATGAACGTTGGTGGCGCCGGAGACATCAAGAGCATGGCCGTTAAAGGTAGCCGGACG  644
                || ||||| ||||||||    ||||| ||    || |||   || || || ||    || 
Sbjct  2520885  GTGATGAATGTTGGTGGAAGTGGAGATATTGCAAGTATGTGGGTGAAGGGAAGTAAAACA  2520944

Query  645      AATTGGATAAGCATGAGCCACAATTGGGGAGCCTCTTACCAAGCTTTTTCCTCTCTCTAT  704
                | |||| ||   |||||||| ||||||||||| || || ||||| ||| |  ||||   |
Sbjct  2520945  AGTTGGTTAGCTATGAGCCATAATTGGGGAGCTTCATATCAAGCATTTGCAACTCTAAGT  2521004

Query  705      GGTCAATCTCTCTCTTTCCGGGTCACTTCTTACACCACCGGTGAAACCATCTAT-GCTTG  763
                || ||| | || |||||   | |||||||||||||  |   |||||| || ||| |||  
Sbjct  2521005  GGACAAACACTTTCTTTTAAGATCACTTCTTACACATCTCATGAAACAAT-TATAGCTAC  2521063

Query  764      GAACGTTGCTCC  775
                 || ||||| ||
Sbjct  2521064  TAATGTTGCACC  2521075


Alignment statistics for match #5
ScoreExpectIdentitiesGapsStrandFrame
48.2 bits(52) 0.28() 47/57(82%) 3/57(5%) Plus/Plus
Query  926      TATGT-TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGTGATATA  980
                ||||| |||| || || ||||||||||| |||||| ||||||| ||  ||| |||||
Sbjct  4807650  TATGTATATATATATATATGTATGTATATATGTATATATGTATATATATGT-ATATA  4807705


Alignment statistics for match #6
ScoreExpectIdentitiesGapsStrandFrame
46.4 bits(50) 0.98() 44/53(83%) 4/53(7%) Plus/Plus
Query  931       TATACATCTACATGTATGTATA-ATGTATGTATGTATCTAATTGTGATATAAC  982
                 |||| || || ||||||||||  |||||||||||||| ||  ||| |||||||
Sbjct  11604685  TATATATATATATGTATGTATGTATGTATGTATGTATGTA--TGT-ATATAAC  11604734


Alignment statistics for match #7
ScoreExpectIdentitiesGapsStrandFrame
44.6 bits(48) 3.4() 35/41(85%) 1/41(2%) Plus/Minus
Query  927       ATGTTATACATCTACATGTATGTATA-ATGTATGTATGTAT  966
                 || ||||| || || ||||||||||  ||||||||||||||
Sbjct  33556908  ATATTATATATATATATGTATGTATGTATGTATGTATGTAT  33556868


GenBankGraphics Next Previous Descriptions
Arabidopsis thaliana clone 255048 mRNA, complete sequence
AY089063.113661
Gene-associated gene details
Map Viewer-aligned genomic context
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
107 bits(118) 3e-19() 267/396(67%) 20/396(5%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGACGAGACCGGTGGTGAAACCATGGGTGGTGCATGTGGG  215
            || |||||||| ||||||||||  |     | |   |  || ||||| ||||| ||||| 
Sbjct  286  GCACACGCCACATTCTACGGTGGTGGTGATGCTTCCGGCACAATGGGAGGTGCTTGTGGA  345

Query  216  TACGGAAACCTTTTTAACAGCGGCTACGGACTGTCCACGGCGGCGCTAAGCACGACATTG  275
            ||||||||||| | || |   ||||| |||     ||||||||||||||||||| |  | 
Sbjct  346  TACGGAAACCTATATAGCCAAGGCTATGGAACCAACACGGCGGCGCTAAGCACGGCTCTA  405

Query  276  TTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTCGAAATCACCG--C  333
            |||||| |||||    | || ||    || ||  |||||| ||| || |||  |  |   
Sbjct  406  TTCAATAATGGTCTAAGTTGTGGTGCTTGCTTCGAGATAAGATG-TCAAAACGATGGAAA  464

Query  334  ATTGTTACT--CTGGAAAATCAACAGTGGTCACAGCCACCAATCTTTGCCCTCCTAA---  388
            || ||  ||  ||||    ||||  || ||||||||||| ||  |||||||||||||   
Sbjct  465  ATGGTGTCTTCCTGG---CTCAATTGTCGTCACAGCCACAAACTTTTGCCCTCCTAACAA  521

Query  389  -TTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCT-AGAACCCATTTCGAT  446
                 |||| |     |||||| || |||||||| || |||||| |  |  ||||| |||
Sbjct  522  CGCCTTACCGA----ACAACGCAGGAGGTTGGTGTAACCCTCCTCASCA-GCATTTTGAT  576

Query  447  ATGGCTAAACCAG-CTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTTGC  505
             |  || | || |  |||||    | ||||| | |  || ||||| ||  |||| || ||
Sbjct  577  CTCTCTCAGCCCGTATTTCAACGCA-TCGCTCAATACAGAGCCGGCATTGTCCCCGTCGC  635

Query  506  ATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTAT  541
             |||||||||||||| |||   || || ||||| ||
Sbjct  636  TTACCGAAGAGTGCCGTGCGTGAGAAGAGGAGGAAT  671


GenBankGraphics Next Previous Descriptions
Rosa hybrid cultivar RhEXPA2 mRNA for alpha expansin, complete cds
AB370117.112811
Alignment statistics for match #1
ScoreExpectIdentitiesGapsStrandFrame
105 bits(116) 1e-18() 270/404(67%) 18/404(4%) Plus/Plus
Query  156  GCTCACGCCACTTTCTACGGTGAC-GAGACCGGTGGTGAAACCATGGGTGGTGCATGTGG  214
            ||||||||||| |||||||| | | | |||   |  || ||||||||| || ||||||||
Sbjct  156  GCTCACGCCACCTTCTACGGCGGCAGCGACGCCTC-TGGAACCATGGGAGGCGCATGTGG  214

Query  215  GTACGGAAACCTTTTTAACAGC---GGCTACGGACTGTCCACGGCGGCGCTAAGCACGAC  271
            ||||||||||||||   |||||   ||||||||| |   ||| || || || |||||  |
Sbjct  215  GTACGGAAACCTTT---ACAGCCAGGGCTACGGAGTCAACACTGCTGCACTGAGCACTGC  271

Query  272  ATTGTTCAATGATGGTTACGGATGCGGCCAATGTTTTCAGATAACATGTTC-GAAATCAC  330
              |||||||  ||||   | | |||||    || ||| ||||  || || | |  |  ||
Sbjct  272  TCTGTTCAACAATGGCCTCAGCTGCGGTGCTTGCTTTGAGAT--CAGGTGCGGCGACGAC  329

Query  331  CGCA----TTGTTACTCTGGAAA---ATCAACAGTGGTCACAGCCACCAATCTTTGCCCT  383
            | ||     ||   | | |||||    || |   | ||||| ||||||||  | ||||||
Sbjct  330  CCCAGGTGGTGCACCCCCGGAAAGCCCTCCATCTTCGTCACCGCCACCAACTTCTGCCCT  389

Query  384  CCTAATTGGTACCAAGACTCCAACGCTGGTGGTTGGTGCAATCCTCCTAGAACCCATTTC  443
            || || |     ||   |  | ||  ||| ||||||||||| ||||| || ||||| |||
Sbjct  390  CCCAACTTCGCTCAGCCCAGCGACAATGGCGGTTGGTGCAACCCTCCCAGGACCCACTTC  449

Query  444  GATATGGCTAAACCAGCTTTCATGAAACTCGCTTACTGGAGGGCCGGTATCATCCCAGTT  503
            ||  | || |  ||    ||| | ||  ||||  | |  |  ||||| ||| |||| || 
Sbjct  450  GACCTCGCCATGCCCATGTTCCTCAAGATCGCCGAGTACAAAGCCGGAATCGTCCCCGTC  509

Query  504  GCATACCGAAGAGTGCCATGCCAAAGGAGTGGAGGTATGAGGTT  547
             | |||||  | || ||||||  || ||| ||||| || |||||
Sbjct  510  TCTTACCGCCGGGTCCCATGCAGAAAGAGGGGAGGGATCAGGTT  553



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