EBAI genome assembly and annotationDataSaccharomyces cerevisiae reference genomeProcessing time (8 cpus)hifiasm SRR13577847 PACBIO HiFi data (Version: 0.16.1-r375, default parameters)flye SRR13577847 PACBIO HiFi data (Version: 2.9, default parameters)hifiasm SRR18210299 PACBIO HiFi data (Version: 0.16.1-r375, default parameters)flye SRR18210299 PACBIO HiFi data (Version: 2.9, default parameters)wtdbg2 ONT data (version 2.5, default parameters)Spades Illumina data
SRR13577847: PACBIO HiFi Sequencing of INSC1019 (S288c-like)
SRR18210299: PACBIO HiFi-Seq of SC CICC-1445
SRR18726953: OXFORD Nanopore reads of Saccharomyces cerevisiae
SRR15597408: Illumina MySeq Saccharomyces cerevisiae IMX2538 data
5x | 10X | 20x | 30x | 80x | |
---|---|---|---|---|---|
real | 0m49.586s | 2m7.974s | 6m40.614s | 14m59.018s | 36m21.314s |
user | 5m12.277s | 15m8.445s | 50m13.354s | 113m53.752s | 281m30.170s |
sys | 0m8.129s | 0m12.066s | 0m19.080s | 0m28.054s | 0m40.540s |
5x | 10X | 20x | 30x | |
---|---|---|---|---|
real | 4m42.615s | 8m39.994s | 14m7.843s | 21m33.068s |
user | 25m18.096s | 47m58.412s | 88m59.589s | 136m52.397s |
sys | 0m39.471s | 0m44.540s | 0m52.261s | 1m8.902s |
5x | 10X | 20x | 40x | 60x | |
---|---|---|---|---|---|
real | 1m14.450s | 2m20.327s | 5m21.222s | 14m27.151s | 26m3.184s |
user | 8m29.651s | 17m1.457s | 40m26.147s | 111m47.800s | 203m4.748s |
sys | 0m9.094s | 0m10.670s | 0m15.781s | 0m23.519s | 0m35.965s |
5x | 10X | 20x | 40x | 60x | |
---|---|---|---|---|---|
real | 7m37.155s | 12m24.975s | 23m40.641s | 51m42.494s | 59m52.398s |
user | 51m8.838s | 79m27.688s | 166m21.369s | 376m9.504s | 432m10.288s |
sys | 0m59.291s | 1m15.422s | 2m0.139s | 2m23.855s | 2m33.427s |
5x | 10X | 20x | 30x | |
---|---|---|---|---|
real | 1m8.501s | 1m49.536s | 2m57.943s | 3m45.641s |
user | 7m56.841s | 13m33.171s | 21m54.447s | 27m20.511s |
sys | 0m4.678s | 0m6.065s | 0m10.023s | 0m12.987s |
5x | 10X | 20x | 30x | |
---|---|---|---|---|
real | 10m48.241s | 9m24.578s | 19m42.245s | 37m27.591s |
user | 34m9.955s | 44m43.176s | 85m1.046s | 125m36.892s |
sys | 0m41.128s | 0m52.490s | 1m17.275s | 1m40.547s |