Nextflow workflow report

[friendly_northcutt]

Run times

25-oct.-2021 14:05:57 - 25-oct.-2021 14:29:20 (duration: 23m 24s)

  66 succeeded  

  0 cached  

  0 ignored  

  0 failed  

Nextflow command

nextflow run nf-core/sarek -c ./genotoul_1.config --input /work2/project/sigenae/Formation_Aln-SNP_chr25-26/input.tsv --genomes_base /work2/project/sigenae/Formation_Aln-SNP_chr25-26/Data --genome Gallus_gallus-5.0_25-26 -resume --tools HaplotypeCaller,FreeBayes,mpileup --generate_gvcf

CPU-Hours

2.3

Launch directory

/work2/project/sigenae/Formation_Aln-SNP_chr25-26

Work directory

/work2/project/sigenae/Formation_Aln-SNP_chr25-26/work

Project directory

/home/sigenae/.nextflow/assets/nf-core/sarek

Script name

main.nf

Script ID

7038b78fec38683f7c82b37e6d822ef7

Workflow session

8e51bad2-dd4b-420b-b603-996af96eb393

Workflow repository

https://github.com/nf-core/sarek, revision master (commit hash 68b9930a74962f3c42eee71f51e6dd2646269199)

Workflow profile

standard

Workflow container

nfcore/sarek:2.7.1

Container engine

singularity

Nextflow version

version 21.04.1, build 5556 (14-05-2021 15:20 UTC)