# BLUPF90 parameter file created by RENF90
DATAFILE
 pheno_file_beta_d.txt
NUMBER_OF_TRAITS
           1
NUMBER_OF_EFFECTS
      3
OBSERVATION(S)
    3
WEIGHT(S)
 
EFFECTS: POSITIONS_IN_DATAFILE NUMBER_OF_LEVELS TYPE_OF_EFFECT[EFFECT NESTED]
 2        1 cross # Mean
 1     1000 cross # Additive genetic
 1     1000 cross # Dominant genetic
RANDOM_RESIDUAL VALUES
 10
 RANDOM_GROUP
   2
 RANDOM_TYPE
 user_file
 FILE
 snp_file_beta_d.txt.Gi                                                
(CO)VARIANCES
10
 RANDOM_GROUP
   3
 RANDOM_TYPE
 user_file
 FILE
 snp_file_beta_d.txt.Di                                                
(CO)VARIANCES
10
OPTION use_yams
#OPTION maxrounds 0