FrameD: downloading the softwareTopReading the outputCreating a model for a new organism

Creating a model for a new organism

If the organism of the sequence you are studying is not available on the initial web page and if no availableorganism model produces satisfactory results, you can directly build a model for your organism from know coding sequences.

From the original web page, click on the text link below the roganism selection and you will be redirected to the AMrkov model building page. Here:

Considering the number of CDS that should be submitted, note that FrameD uses interpolated Markov models which automatically adjust the order of the model to the amount of data. So, the larger the data set the better the model. On small data sets, you may get poor prediction performances but overfitting problems should not occur.


FrameD: downloading the softwareTopReading the outputCreating a model for a new organism